PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0066s00037.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family AP2
Protein Properties Length: 491aa    MW: 52810.2 Da    PI: 6.5169
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0066s00037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84.1e-11352416155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpse...ng.....kr..krfslgkfgtaeeAakaaiaarkkleg 55 
                           s+ kGV+ ++ + rW+A+++d s     +     ++  k+++lg f +++eAa+a+++a+  ++g
  Dusal.0066s00037.1.p 352 SKRKGVTKHRHTLRWEAHLWDNSAprtHNagkkgRTrgKQVYLGGFASEDEAARAYDRAAIVYYG 416
                           688******************66677733687662268**********99*********988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.78E-13352422No hitNo description
SuperFamilySSF541716.54E-10352422IPR016177DNA-binding domain
PROSITE profilePS5103214.671353424IPR001471AP2/ERF domain
SMARTSM003802.4E-17353430IPR001471AP2/ERF domain
PfamPF008472.1E-7353415IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-11355422IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MQACSFNNTA AEACRVSLDL QIQLLCMERD EMQREAMLAE QQKEGLGGSQ PSSQGVGLVG  60
TVLEDKAQQG QRKASSALEG WPKWLQDWQK GVVPQGQALQ LRRQEGAWHE EQEIGSDGSE  120
EEEFGAGPDD GKQAHEAYLW NGNSHPSAPH YPPQPTQAEA HWQHQFLTQL PPGAAPSQQQ  180
PKGEQLLGLS TLLHASGTSR EGRYPSSVHS QLPPAALPPL DSSIAQGGPP NLPGLLLPGM  240
GMLPGAGGGG LNPMDSLNAT QSNSAAEERG SSGSGGDGES EDMVVDEDGE EGSASDSSSL  300
EEEVTRRSSR RGKGMRKGGF RPGGWGQQVE RVEGGVAKAA GVQRNRPAGG TSKRKGVTKH  360
RHTLRWEAHL WDNSAPRTHN AGKKGRTRGK QVYLGGFASE DEAARAYDRA AIVYYGTSTQ  420
LNGTLADYEN ELDMLQSLSK EQVVAMLRRS SGFSRGYVHR PCFESLQSAE VPTPPRQRNK  480
AHVSSRCWRS *
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP561657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.17e-22AP2 family protein