PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0049s00015.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

C2H2

Protein Properties

Length: 629aa MW: 66190.3 Da PI: 9.8044

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0049s00015.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.3e-05	401	420	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg++F r++ ++rH++++ Dusal.0049s00015.1.p 401 CSTCGRTF-RPDAFERHLKVC 420 ******.*******987 PP
2	zf-C2H2	12.3	0.0005	527	547	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg+s r++ L +H+r++ Dusal.0049s00015.1.p 527 RCKHCGRSM-RPDALSKHQRLC 547 8******.********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13913	0.0035	142	163	No hit	No description
Pfam	PF13913	1.3E-7	215	237	No hit	No description
Pfam	PF13913	0.077	323	344	No hit	No description
Pfam	PF13913	4.2E-8	398	420	No hit	No description
Pfam	PF13913	0.016	453	472	No hit	No description
Pfam	PF13913	1.9E-4	525	547	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence Send to blast
MEWNSHNNYR SSDSLISRFA RSPSANRSRP PSHQGEGQLL RLHRSGSNGR SSSNGGPSSA 60 GRASTTDKSM LPGHSHSILS SKLEASRQAF RASQTSMARP LSAGPRPRSS SVSRPGSGSQ 120 LRGSDPSPLL PRREGERPRA YTCYLCGQQY GSASLMIHIP QCQKKWIAVE EQKPRRERRP 180 LPPPPSSIAG GQLPTGKGAD DFNEEMYQHW DQKSLVGCPF CARTFRPEAF EKHKKVCTAA 240 NPGGPLGPGR NQVPRAGGVA GPANPGRPAS PASRGPGGAR PPSGGPPAAA PTAANMSRPG 300 PAAAGTRGSG GGGGMASKPL GFTCYLCGQQ YGSASLIIHI GQCQKKWVTV NSTKPRREQR 360 PLPPPPPLLH DLEALPTSPQ GIEDFNREMF AYWDKVSLMA CSTCGRTFRP DAFERHLKVC 420 APKPGSPAAG GSGGGRGAGG GPNYDARPRA YNCYLCGQQY GSQSLLIHIP QCFEKWLKVE 480 AAKPPKERRE PPPPPPELDE PLPTHPDEID AFNARMCGAF NDKSLMRCKH CGRSMRPDAL 540 SKHQRLCTAE SPMKGGGGGS PSAGGGGGGG GSSSSSPAAV AGAGVPGMTM GSSSGNGGPA 600 EYADEGGEDL EECEHCNRRM RYACVTII*

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence Send to blast

MEWNSHNNYR SSDSLISRFA RSPSANRSRP PSHQGEGQLL RLHRSGSNGR SSSNGGPSSA  60
GRASTTDKSM LPGHSHSILS SKLEASRQAF RASQTSMARP LSAGPRPRSS SVSRPGSGSQ  120
LRGSDPSPLL PRREGERPRA YTCYLCGQQY GSASLMIHIP QCQKKWIAVE EQKPRRERRP  180
LPPPPSSIAG GQLPTGKGAD DFNEEMYQHW DQKSLVGCPF CARTFRPEAF EKHKKVCTAA  240
NPGGPLGPGR NQVPRAGGVA GPANPGRPAS PASRGPGGAR PPSGGPPAAA PTAANMSRPG  300
PAAAGTRGSG GGGGMASKPL GFTCYLCGQQ YGSASLIIHI GQCQKKWVTV NSTKPRREQR  360
PLPPPPPLLH DLEALPTSPQ GIEDFNREMF AYWDKVSLMA CSTCGRTFRP DAFERHLKVC  420
APKPGSPAAG GSGGGRGAGG GPNYDARPRA YNCYLCGQQY GSQSLLIHIP QCFEKWLKVE  480
AAKPPKERRE PPPPPPELDE PLPTHPDEID AFNARMCGAF NDKSLMRCKH CGRSMRPDAL  540
SKHQRLCTAE SPMKGGGGGS PSAGGGGGGG GSSSSSPAAV AGAGVPGMTM GSSSGNGGPA  600
EYADEGGEDL EECEHCNRRM RYACVTII*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	440	GGRGAGGG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_001692001.1	1e-125	predicted protein
TrEMBL	A0A150G316	1e-125	A0A150G316_GONPE; Uncharacterized protein
STRING	EDP04491	1e-124	(Chlamydomonas reinhardtii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP7787	5	6

Link Out ? help Back to Top
Phytozome	Dusal.0049s00015.1.p