PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0049s00014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | C2H2 | ||||||||
Protein Properties | Length: 143aa MW: 15043.2 Da PI: 12.3 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 92 | 103 | 2 | 13 |
EETTTTEEESSH CS zf-C2H2 2 kCpdCgksFsrk 13 +Cp+Cg++F+++ Dusal.0049s00014.1.p 92 QCPHCGRRFNQQ 103 8********776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13913 | 3.7E-8 | 90 | 112 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence Send to blast |
MAKQRLQGTE AASLQRAGRP PGTTRPGSRM QSVQPARQPG GAAGGMPKWK AQSEALRQAM 60 AATRQVNSAL ARGESLRNLP PPPSIPDPSF IQCPHCGRRF NQQAAERHIP ACANTIAKPK 120 FLKAGTGGSG AGAPQSRRLP RY* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002946931.1 | 7e-33 | hypothetical protein VOLCADRAFT_87026 | ||||
TrEMBL | A0A250XJ53 | 1e-44 | A0A250XJ53_9CHLO; Uncharacterized protein | ||||
STRING | XP_002946931.1 | 3e-32 | (Volvox carteri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP7787 | 5 | 6 |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0049s00014.1.p |