PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0035s00038.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family AP2
Protein Properties Length: 533aa    MW: 55396.1 Da    PI: 4.7851
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0035s00038.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.11.9e-1267116155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                           s+++GV+w+kk+ rW A I        + k+++lg++  ++eAak  ++a+ +l+g
  Dusal.0035s00038.1.p  67 SKFRGVCWNKKNRRWQAAINS------SgKYIYLGSYVQEDEAAKSFDRAAIRLRG 116
                           79****************888......44**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-767116IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-1267126IPR016177DNA-binding domain
CDDcd000186.22E-1267126No hitNo description
SMARTSM003803.6E-1268130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-1168124IPR001471AP2/ERF domain
PROSITE profilePS5103213.60468124IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MDQLMMLGQN LGSGLFKPED YFANLQAMNG AAQASGDEAA TAGAHGIDGL DDLEGSPGPN  60
SDKPLTSKFR GVCWNKKNRR WQAAINSSGK YIYLGSYVQE DEAAKSFDRA AIRLRGQRAK  120
LNYHISTYQD EFGQIIEDKK LSEHLTNILG KEAAAAKSGK SSKNGNNRDS SAEVPDLQSM  180
LGMHQQMQQQ QQQQQQQQQQ QAGGASSGGG GGVGGGGAGS GTGGCAGGSG FDASQQLLAS  240
FQQNLSAMMP PPNPSTTRSP HYPYNGGQRH NYGVLDVPEG CSLTAHIPGD EEVFAVLYTG  300
PMFVPESLGA AVWDGHGAID LGIYDTDKDA RQAAGTVLRL VMFNRHALGG VSGGEDGAGA  360
CHQGGPHGHH QYRDAAADEG GDEGEDPAFT AAAAAAAAAA GNGEAHGAGT EEDGSSEGAQ  420
GGAGSEQAQY NALFQWLAQF HQGTQAQARE GEHGSMDDGV VASTDANGGG LKSVRDQEGE  480
QQAVGPAAKR ARGRRGSVQN GVVCKQEEQE AEGVAHSMDQ VFQVGQQEPD HQ*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP3683512
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.16e-10AP2 family protein