PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0025s00052.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family NF-X1
Protein Properties Length: 465aa    MW: 50043 Da    PI: 8.2181
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0025s00052.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X117.87.2e-06252270119
              zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                           CG+H C++ CH GpC++Cp
  Dusal.0025s00052.1.p 252 CGNHVCERVCHSGPCGECP 270
                           ******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS01359053128IPR019786Zinc finger, PHD-type, conserved site
SMARTSM004381.8199218IPR000967Zinc finger, NF-X1-type
PfamPF0142216199216IPR000967Zinc finger, NF-X1-type
CDDcd060086.83E-10242291No hitNo description
SMARTSM004380.002252271IPR000967Zinc finger, NF-X1-type
PfamPF014222.4E-5252270IPR000967Zinc finger, NF-X1-type
CDDcd060087.97E-10296344No hitNo description
SMARTSM004384.8306325IPR000967Zinc finger, NF-X1-type
PfamPF014220.037306324IPR000967Zinc finger, NF-X1-type
SMARTSM0043866424447IPR000967Zinc finger, NF-X1-type
PfamPF014221436445IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009908Biological Processflower development
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042335Biological Processcuticle development
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000037Biological Processregulation of stomatal complex patterning
GO:0005634Cellular Componentnucleus
GO:0000987Molecular Functioncore promoter proximal region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MSEAARTLFE QYMSALGTQD ARNPDDPSDQ VFARGMARVT EFLSSTGSDA AVCLICLSHI  60
KPSEAVWSCS SSCFAVLHLP CIQEWARNQV DACVMRQLDK IEDEEAHGEA PLTAAQARAA  120
AEWGCPKCRQ QYPASELPRT YTCFCGKEKI GNGHTAVPAC GASLRAEAGK GACGKRRSKR  180
RCGHQAYSCG RPCGKIQPCG HPCSAPCHPP GCCPPCEIVT ERPCACGAEK RRVACCEGLF  240
HCGKPCGRRL ACGNHVCERV CHSGPCGECP HQGVRTCPCG KAVYPELKCT EKAPTCGATC  300
GKLLPCGLHT CHDRCHHGEC SSCRALVSKP CRCGKMMREV LCGAELLCDR RCTKLRSCTR  360
HPCNMMRRSC VSIAGRPHEM KCHGSPPVSF QCACGQGQYS VPCGAESKVV APRCNNPCPM  420
PGLCRHAQQS GTVRHRCHYG PCPPCVQPCG TPLPCGHLCR VPVCY
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP530277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.11e-86sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors