PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0014s00031.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | AP2 | ||||||||
Protein Properties | Length: 433aa MW: 48203.2 Da PI: 8.1535 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.9 | 4e-11 | 13 | 58 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 s+y+GV+w+ +W+A+ ++ + + +lg f+t eeAaka++ a + Dusal.0014s00031.1.p 13 SKYRGVTWNAEARKWRAQAQE---G--GRMAQLGLFDTQEEAAKAYDIAVL 58 89****************666...3..39999***************9976 PP | |||||||
2 | AP2 | 34.3 | 6.1e-11 | 98 | 149 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV+w++ +WvA ++d ++ ++g+f +e+Aa+a+++ + k+ g Dusal.0014s00031.1.p 98 SQYKGVSWNSACSKWVAVLWD----ReLKRARHIGSFEAEEDAARAYDREAIKMLG 149 78*******************....3344888*******************99987 PP | |||||||
3 | AP2 | 46.7 | 8.1e-15 | 189 | 238 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+w+ +++rW+++ ++ + k++ +g+f ++ eAa+a+++a ++l+g Dusal.0014s00031.1.p 189 SHYRGVSWHDRSNRWEVR--VW-GG--GKQHFIGSFTSEAEAARAYDKAVLRLRG 238 79**************77..55.22..4**********99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.4E-7 | 13 | 56 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.84E-12 | 13 | 71 | No hit | No description |
SuperFamily | SSF54171 | 1.63E-10 | 13 | 71 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.4E-7 | 14 | 75 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 11.759 | 14 | 69 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-9 | 14 | 70 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.4E-5 | 98 | 149 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.23E-15 | 98 | 159 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-13 | 98 | 158 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 12.774 | 99 | 157 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.6E-12 | 99 | 163 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-13 | 99 | 158 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-13 | 189 | 251 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.6E-8 | 189 | 238 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.52E-11 | 189 | 252 | No hit | No description |
SMART | SM00380 | 7.9E-10 | 190 | 256 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-11 | 190 | 251 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.145 | 190 | 250 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MALMNACACV QTSKYRGVTW NAEARKWRAQ AQEGGRMAQL GLFDTQEEAA KAYDIAVLKG 60 GRKERTNFPP SYYKDGGYSG TVTTGRGSRN TQHTRVTSQY KGVSWNSACS KWVAVLWDRE 120 LKRARHIGSF EAEEDAARAY DREAIKMLGS EAGLNFRESM ADFLASTGTD VSHLKVDPDN 180 LGPANKSTSH YRGVSWHDRS NRWEVRVWGG GKQHFIGSFT SEAEAARAYD KAVLRLRGQD 240 ARSRSRMNFP LSDYNIDEIM AEPLSAIGRG TLPAFLLDRP ARRSGRQPRR RHKDDEITDD 300 SEMEETEPSE MMEEDVEVPE GVCRRESVSR TPTSPHFLRT LHTFNLGEVG IKPQVFLCKE 360 GVSNEWALVL DCFISLSAAP TASPRLVAFR AHGMLMRFAI VIVLLTSGYT RQSPRCSEIA 420 VACSVPDGCL ES* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002946570.1 | 1e-100 | pathogenesis-related genes transcriptional activator | ||||
TrEMBL | A0A250X658 | 1e-104 | A0A250X658_9CHLO; Uncharacterized protein | ||||
STRING | XP_002946570.1 | 2e-99 | (Volvox carteri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP5740 | 8 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 4e-15 | AP2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0014s00031.1.p |