PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0006s00029.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | ARR-B | ||||||||
Protein Properties | Length: 365aa MW: 41205.9 Da PI: 6.9059 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 82.1 | 6.1e-26 | 296 | 349 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ W+ e+H++Fv+av+ L G +kA+P++il+lm++ gLt+e+v+SHLQkYRl Dusal.0006s00029.1.p 296 KPRVIWSVEMHQQFVNAVNIL-GVDKAVPRKILDLMDIGGLTRENVASHLQKYRL 349 79*******************.********************************8 PP | |||||||
2 | Response_reg | 72 | 2.3e-24 | 3 | 102 | 10 | 109 |
HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESE CS Response_reg 10 vrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakd 96 v+++l+q+l+ +y +v+++++g++a+++l+ + +Dl+l+D++mp+mdG++ll+ i e++lp+i+++++g+ e++l+ + Ga d Dusal.0006s00029.1.p 3 VLRVLEQMLRLCQY-SVTSCTSGTSAVAQLRSQPdnFDLVLCDVMMPDMDGFKLLE-IVGLEMDLPVIMISGNGDTETVLRGVTHGAVD 89 67899*********.***************777777*******************7.5556679************************* PP EEESS--HHHHHH CS Response_reg 97 flsKpfdpeelvk 109 fl Kp+ +eel++ Dusal.0006s00029.1.p 90 FLIKPVRIEELRN 102 ***********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 37.737 | 1 | 108 | IPR001789 | Signal transduction response regulator, receiver domain |
SMART | SM00448 | 6.2E-22 | 1 | 104 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 4.3E-21 | 3 | 102 | IPR001789 | Signal transduction response regulator, receiver domain |
SuperFamily | SSF52172 | 3.7E-31 | 3 | 112 | IPR011006 | CheY-like superfamily |
CDD | cd00156 | 8.47E-26 | 3 | 108 | No hit | No description |
Gene3D | G3DSA:3.40.50.2300 | 7.7E-33 | 3 | 115 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 5.6E-27 | 293 | 353 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.17E-19 | 293 | 353 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.624 | 293 | 352 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 1.1E-21 | 296 | 349 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010082 | Biological Process | regulation of root meristem growth | ||||
GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process | ||||
GO:0031537 | Biological Process | regulation of anthocyanin metabolic process | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048367 | Biological Process | shoot system development | ||||
GO:0080022 | Biological Process | primary root development | ||||
GO:0080036 | Biological Process | regulation of cytokinin-activated signaling pathway | ||||
GO:0080113 | Biological Process | regulation of seed growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence Send to blast |
MQVLRVLEQM LRLCQYSVTS CTSGTSAVAQ LRSQPDNFDL VLCDVMMPDM DGFKLLEIVG 60 LEMDLPVIMI SGNGDTETVL RGVTHGAVDF LIKPVRIEEL RNVWQHVMRR RLEGEPFGLD 120 TSDNDLSMDD QEEAPPPVGQ PPLSPEPLAI PLDVCSLPMP QPQLPPQVPA YPPPPPMTQT 180 LHQPLQPMQQ HQPQQHQQQQ QQLLLQQQHR AQHLQQQHLQ QQHLQQQHQQ QHPQQRQHQQ 240 HIQDHHQLPI APPPPSLQLT KKPSSSSSSK AAKSSKSGQK KRKESEAGEE GSTSKKPRVI 300 WSVEMHQQFV NAVNILGVDK AVPRKILDLM DIGGLTRENV ASHLQKYRLY LKKVDANPDE 360 QFTH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 1e-19 | 292 | 354 | 1 | 63 | ARR10-B |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins (PubMed:22383541). {ECO:0000250|UniProtKB:Q940D0, ECO:0000269|PubMed:22383541}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005652114.1 | 3e-47 | CheY-like protein | ||||
Swissprot | Q5SML5 | 2e-44 | ORR22_ORYSJ; Two-component response regulator ORR22 | ||||
TrEMBL | A0A2J8A7S0 | 2e-46 | A0A2J8A7S0_9CHLO; Two-component response regulator ARR1 | ||||
STRING | XP_005652114.1 | 1e-46 | (Coccomyxa subellipsoidea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP1220 | 15 | 16 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 7e-42 | response regulator 12 |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0006s00029.1.p |
Publications ? help Back to Top | |||
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