PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do028906.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family GRAS
Protein Properties Length: 276aa    MW: 31355.5 Da    PI: 4.5532
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do028906.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS28.61.8e-093495143200
        GRAS 143 RiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                 Ri g+++ ++       + e+eetg+rL+++A+++gvpf+f+  +a  +e++++++L+++p+E
  Do028906.1  34 RISGLSRLHKIrilrcPNVEVEETGHRLSNYASQFGVPFRFHG-IAAWWETITIDDLDIDPDE 95 
                 7888888776688888999************************.7999*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035146.1E-73495IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
LRELRLYELT NLTSVENFPS FVELDVFDCP ELKRISGLSR LHKIRILRCP NVEVEETGHR  60
LSNYASQFGV PFRFHGIAAW WETITIDDLD IDPDEPNGAE PEQSGKMVEK MVFERSGYSV  120
MTANSHSLER SRSKKLLRKD SDFADGRTSL GDFCSLHKAS TNSCYLQYLP NRQHTQSFDL  180
YHALLPTMAA MPEEVQDRHG LLDVADLELF SPFVFLDLPP MLCPDGEDPA SSDDLVLPFI  240
LMMLMEEDID VLTPEFGLVQ AAAQRVKESA QGRRQN
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo028906.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5WM130.0A0A1E5WM13_9POAL; Uncharacterized protein (Fragment)