PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do027727.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 38aa    MW: 4178.97 Da    PI: 9.4462
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do027727.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.42e-081335123
         NAM  1 lppGfrFhPtdeelvveyLkkkv 23
                lp GfrF+P deel+ +yL++k+
  Do027727.1 13 LPIGFRFRPIDEELLLHYLRRKA 35
                799******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-9635IPR003441NAC domain
PROSITE profilePS5100513.1691338IPR003441NAC domain
PfamPF023651.3E-51435IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 38 aa     Download sequence    Send to blast
MLQGTAGAPV AGLPIGFRFR PIDEELLLHY LRRKAPAC
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo027727.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9699704e-31EU969970.1 Zea mays clone 337945 NAC domain-containing protein 68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817662.13e-14NAC domain-containing protein 83-like isoform X1
RefseqXP_025817663.13e-14NAC domain-containing protein 10-like isoform X2
TrEMBLA0A1E5VC207e-19A0A1E5VC20_9POAL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-09NAC domain containing protein 47