PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do027702.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 289aa    MW: 32774.3 Da    PI: 5.3005
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do027702.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.31.9e-0878116145
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                 s+y+GVr ++ +grW AeIr p     +k+     ++t eeAa+a
  Do027702.1  78 SRYRGVRLRE-SGRWQAEIRNPL----TKKREYSLHDT-EEAAAA 116
                 79*******9.7*********73....344444689**.988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.94E-878127IPR016177DNA-binding domain
CDDcd000182.67E-1278118No hitNo description
Gene3DG3DSA:3.30.730.101.1E-979121IPR001471AP2/ERF domain
SMARTSM003800.002679128IPR001471AP2/ERF domain
PROSITE profilePS5103212.2679135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MLRSKKMPPM RKVRIICYDP DATDSSSDED DQNPKKQKKI IREVLVPVNK YKTSKPLKTT  60
MPCGIKDLNG PESKVRSSRY RGVRLRESGR WQAEIRNPLT KKREYSLHDT EEAAAATYQA  120
KWNQFHPKML AMKAQPSMSE HAALSSLSLV SCLSSSVSCE QKAQEALNKV GSLMEIYREP  180
VDKSLLNFLP KPMELSEDVM LNQKDEHPIS DSVSPANELP PDDITRPEDM FTVSDFIGAT  240
YKPLNDDYIG LADISHLPLP IKDPEFDLDA ELDWSGFDFA SLERELELL
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo027702.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956541.11e-162ethylene-responsive transcription factor ERF118
RefseqXP_004956542.11e-162ethylene-responsive transcription factor ERF118
RefseqXP_004956543.11e-162ethylene-responsive transcription factor ERF118
RefseqXP_004956544.11e-162ethylene-responsive transcription factor ERF118
RefseqXP_012698904.11e-162ethylene-responsive transcription factor ERF118
RefseqXP_022679546.11e-162ethylene-responsive transcription factor ERF118
TrEMBLA0A1E5W8X80.0A0A1E5W8X8_9POAL; Uncharacterized protein
STRINGSi030706m1e-161(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-13ERF family protein