PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do026215.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 268aa    MW: 29288.7 Da    PI: 11.0348
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do026215.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM675.6e-2171131107
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskk 96 
                 l+pGfrF+P+dee+v +yL +++++++l++   i e d +++ Pw L +    k++++  +fF+  +  + +g+r++r  +  g+W+ +gk k+ + k 
  Do026215.1   7 LAPGFRFEPKDEEVVAHYLLRRIRDQPLPV-GDILEDDPLSAPPWILLEkyGRKSRKRGAFFFAAGQAMNGKGSRQKRsCAGGGTWEGQGKRKRAKGK- 103
                 579***************************.669999**********7412334456688******************88889********9988764. PP

         NAM  97 gelvglkktLv 107
                     g k + v
  Do026215.1 104 -GSEGEKLSVV 113
                 .3456555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-223103IPR003441NAC domain
PROSITE profilePS5100523.2877153IPR003441NAC domain
PfamPF023653.1E-129106IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAAALGLAPG FRFEPKDEEV VAHYLLRRIR DQPLPVGDIL EDDPLSAPPW ILLEKYGRKS  60
RKRGAFFFAA GQAMNGKGSR QKRSCAGGGT WEGQGKRKRA KGKGSEGEKL SVVVRGERST  120
QARRVTGVAE RVTLRSVFSR ELYSAAACLV KRGRRCARRP VVTTSCTEAA GRSAWLANAE  180
WPEWVSISLP PGSHEFQNSV VHPSPTSMVV RSLYAASSSI VAFQCAPSRP LSMVATGQVS  240
VATDPERPGR VVRHMQLICL CKSFKSKH
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo026215.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.12e-12NAC domain containing protein 52