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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do024444.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
LFY |
Protein Properties |
Length: 388aa MW: 41827.6 Da PI: 9.3107 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do024444.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 535.2 | 2.4e-163 | 1 | 378 | 1 | 386 |
FLO_LFY 1 mdpea.fsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseif 97
mdp++ fsa+ f+wd + pa +++ +++p + a + rele+l+ +yGvr +tva+i+elGft+stL++m+++eldd+m++l+ +f
Do024444.1 1 MDPNDaFSAAhPFRWDLGP-----PAPAAPAPPPPPPP--MPLAPPVSAPRELEDLVAGYGVRPSTVARISELGFTASTLLGMTERELDDMMAALAGLF 92
777654876559****532.....22222222222333..33455566789************************************************ PP
FLO_LFY 98 rldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskk..kqk 194
r+d+l+Ger+G++aa+raer r+++ r + + ++lda+sqe+ls+e++ aa+sgg ea+ +++ kk+ ++ a++k k++
Do024444.1 93 RWDVLLGERFGLRAALRAERGRVMSLG--GGRFH-----NGSTLDAASQEVLSDERD-----AAASGGVADDEAGRRMVTGKKQAKKGAAAARKgkKAR 179
************************966..66663.....5779***********987.....4556655555555555554444444333333211222 PP
FLO_LFY 195 rkkkkelkse......edede...eeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnq 284
rk++ + ded +e+++++ g+g +g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq+iak G+k+Ptkvtnq
Do024444.1 180 RKRELR--PLdvledeGDEDGgggSESTESSAGGGGGGGAERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRVFLLQVQSIAKLGGHKAPTKVTNQ 276
222222..11344433222221112333344444777888*********************************************************** PP
FLO_LFY 285 vfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlers 383
vfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrra+k+rgenvGawrqacy+plv+iaar+g+didavf+ahprL+iWYvPt+LrqLCh++r
Do024444.1 277 VFRYAKKCGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKARGENVGAWRQACYAPLVEIAARHGFDIDAVFAAHPRLAIWYVPTRLRQLCHQARG 375
**************************************************************************************************9 PP
FLO_LFY 384 kas 386
+++
Do024444.1 376 SHA 378
876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MDPNDAFSAA HPFRWDLGPP APAAPAPPPP PPPMPLAPPV SAPRELEDLV AGYGVRPSTV 60 ARISELGFTA STLLGMTERE LDDMMAALAG LFRWDVLLGE RFGLRAALRA ERGRVMSLGG 120 GRFHNGSTLD AASQEVLSDE RDAAASGGVA DDEAGRRMVT GKKQAKKGAA AARKGKKARR 180 KRELRPLDVL EDEGDEDGGG GSESTESSAG GGGGGGAERQ REHPFVVTEP GEVARAKKNG 240 LDYLFHLYEQ CRVFLLQVQS IAKLGGHKAP TKVTNQVFRY AKKCGASYIN KPKMRHYVHC 300 YALHCLDEEA SNALRRAYKA RGENVGAWRQ ACYAPLVEIA ARHGFDIDAV FAAHPRLAIW 360 YVPTRLRQLC HQARGSHAAA GLPPPPMF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY179882 | 0.0 | AY179882.1 Zea mays cultivar A632 floricaula/leafy-like 1 (fl1) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 3e-98 | floral meristem identity control protein LEAFY (LFY) |