PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do024083.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 250aa    MW: 27459.1 Da    PI: 9.6847
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do024083.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.51.1e-16172218552
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                 +r++r++kNRe+A rsR+RK+a++ eLe+k+++Le+eN++L+ +l++l
  Do024083.1 172 RRQKRMIKNRESAARSRARKQAYTNELENKIAQLEEENERLR-KLKML 218
                 79****************************************.67766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.2E-15166214No hitNo description
SMARTSM003381.6E-10168248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.53170214IPR004827Basic-leucine zipper domain
PfamPF001709.5E-14172214IPR004827Basic-leucine zipper domain
CDDcd147074.44E-22172224No hitNo description
SuperFamilySSF579594.94E-12172214No hitNo description
PROSITE patternPS000360175190IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MSSHGDDGRR GLSRQGSVYS LTLTEVETQL GEPLRSMNLD DLLRTVLPAV EPPAAAAAKK  60
TVDEVWRDIQ SASGARQPTM GEMTLEDFLS RAGVAVDAGG AGCAGPHWLH QYPPQQQYVL  120
PRPLPLGAAG GPALDAVYRD GVGVFLSQVV GRKRGAAAAV AGDGVVERTV ERRQKRMIKN  180
RESAARSRAR KQAYTNELEN KIAQLEEENE RLRKLKMLEP LEPPPEQHER RPLPQPEAKQ  240
QLRRMNSASF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151174RKRGAAAAVAGDGVVERTVERRQK
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo024083.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0951244e-82FP095124.1 Phyllostachys edulis cDNA clone: bphylf025g11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799932.11e-136ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_025799933.11e-136ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_025799934.11e-136ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9C5Q22e-55AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A1E5UQI41e-180A0A1E5UQI4_9POAL; Uncharacterized protein
STRINGPavir.Ba00263.1.p1e-114(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.36e-33bZIP family protein
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]