PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do023975.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 642aa    MW: 69644.5 Da    PI: 5.3891
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do023975.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM531.1e-162215211127
         NAM  11 deelvveyLkkkvegkkleleev..ikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk 95 
                 d+el+  +L++k++g+ l+++ +  ++++diy ++P +L            +  +  ++w+fF++ + k+++++rk+r++   +g+W++    ++vl+ 
  Do023975.1  22 DDELL-GFLRRKLAGEVLPAAAAahFHDADIYAADPATLTLgyqpaparkgEQGGPGSSWFFFTRVRPKSSSDSRKSRMVGggAGTWHSERAPRPVLDG 119
                 88999.89********9665442249*************84467777653322224459*******************87645889************9 PP

         NAM  96 kgelvglkktLvfykg.rapkgektdWvmheyr 127
                 +g+ vg  + + f ++  +  +e+tdW m e++
  Do023975.1 120 EGSCVGHSQYFSFKRKtGKGCSERTDWYMVEFS 152
                 9************9653556678********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.39711177IPR003441NAC domain
SuperFamilySSF1019413.79E-2022177IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MRRPLAAETP QPGDPASSTL ADDELLGFLR RKLAGEVLPA AAAAHFHDAD IYAADPATLT  60
LGYQPAPARK GEQGGPGSSW FFFTRVRPKS SSDSRKSRMV GGGAGTWHSE RAPRPVLDGE  120
GSCVGHSQYF SFKRKTGKGC SERTDWYMVE FSEAQEGDHE RLHGGEPALV LCNIYKKHSS  180
SRSSSSSRSS RKRKPVEEHP SQSFAPVKAK RRLFEPPAHT PAATSEEQVS SGFPMFTSPL  240
ESPGEAAKFE ILPSHGKIGC ALYQDQAFDG KIGGTLDHHP IFCSELEASQ GMIDSTSDYL  300
IFSPEPVMSQ KKMSTTTPSL LMSEPDVPQS KIRDTLDHLR FWPETEASQG MIDSPSAYLK  360
FSPEAETLQN KTSTTPPSLL MSEPDASQRK ISSTSDHVRF WAEAEESQDM IDSPSAYLNF  420
SPESESLHNK TSTAPPILLM SEPEAAHNKA TAPSLLLSEP ETVQGKIGGT SDYLRFWPEP  480
EASQGMFNGT SDYLKTSSET KELQNKTSAT TPPSLSRFEP EVPAPQGEMA TFDSGIQVAG  540
GDPPLAPCYG TTNLMIDGYS SGIPLWRRDP WSSASWTGND NITTTSSCRN LGWTVGAQPT  600
SNLWSTTGFA SSPNLCSMPS TTLLPPPLSP SPWYGGPVLW SF
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo023975.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961529.10.0uncharacterized protein LOC101760926 isoform X1
TrEMBLA0A1E5UTN80.0A0A1E5UTN8_9POAL; Uncharacterized protein
STRINGSi038541m1e-151(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16781612