PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do022457.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 354aa MW: 38177.7 Da PI: 9.9548

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do022457.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.4	4.3e-15	274	326	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkev 56 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L+ N++L kk++e+l+k+ Do022457.1 274 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKDLNEELhKKQVEMLEKQK 326 79*************************************99344577777764 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-14	270	335	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.749	272	317	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.5E-15	274	328	No hit	No description
SuperFamily	SSF57959	1.76E-10	274	324	No hit	No description
Pfam	PF00170	2.5E-13	274	327	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.35E-24	274	326	No hit	No description
PROSITE pattern	PS00036	0	277	292	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:1900057	Biological Process	positive regulation of leaf senescence
GO:1903648	Biological Process	positive regulation of chlorophyll catabolic process
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence Send to blast
MDFSGGSGRR QQQPEPEHLP PMTPLPLARQ GSVYSLTFDE FQSALGGAGK DFGSMNMDEL 60 LRSIWTAEET HAVAAANASA ASAAAADHAA RASIQRQGSL TLSRTLSQKT VDEVWRDIMF 120 FGGPSAAPAE AAAAPPSPAQ RQQTLGEVTL EEFLVRAGVV REDMTAPPPV PPVPLATPPQ 180 PPPPQPPMLF PHSNVFAPLV PPLPFGNALV PGAVGPGDGA APPAVSPVRP IMSNGFGKME 240 GGDLSSLSPS PVPYVFNGGL RGRKAPAMEK VVERRQRRMI KNRESAARSR QRKQAYMMEL 300 EAEVAKLKDL NEELHKKQVE MLEKQKNEVL ERMTRQVGPT AKRICLRRTL TGPW

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence Send to blast

MDFSGGSGRR QQQPEPEHLP PMTPLPLARQ GSVYSLTFDE FQSALGGAGK DFGSMNMDEL  60
LRSIWTAEET HAVAAANASA ASAAAADHAA RASIQRQGSL TLSRTLSQKT VDEVWRDIMF  120
FGGPSAAPAE AAAAPPSPAQ RQQTLGEVTL EEFLVRAGVV REDMTAPPPV PPVPLATPPQ  180
PPPPQPPMLF PHSNVFAPLV PPLPFGNALV PGAVGPGDGA APPAVSPVRP IMSNGFGKME  240
GGDLSSLSPS PVPYVFNGGL RGRKAPAMEK VVERRQRRMI KNRESAARSR QRKQAYMMEL  300
EAEVAKLKDL NEELHKKQVE MLEKQKNEVL ERMTRQVGPT AKRICLRRTL TGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269\|PubMed:18931143, ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:27325665, ECO:0000269\|PubMed:27424498}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do022457.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:18931143}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954029.1	0.0	bZIP transcription factor 23
Swissprot	Q6Z312	1e-164	BZP23_ORYSJ; bZIP transcription factor 23
TrEMBL	A0A1E5VDK6	0.0	A0A1E5VDK6_9POAL; ABSCISIC ACID-INSENSITIVE 5-like protein 7
STRING	Si017618m	1e-171	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	6e-42	ABRE binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Xiang Y,Tang N,Du H,Ye H,Xiong L Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiol., 2008. 148(4): p. 1938-52 [PMID:18931143] Shen J,Xie K,Xiong L Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses. Mol. Genet. Genomics, 2010. 284(6): p. 477-88 [PMID:20941508] Luo C,Guo C,Wang W,Wang L,Chen L Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant Cell Rep., 2014. 33(2): p. 323-36 [PMID:24247850] Sakuraba Y, et al. Rice ONAC106 Inhibits Leaf Senescence and Increases Salt Tolerance and Tiller Angle. Plant Cell Physiol., 2015. 56(12): p. 2325-39 [PMID:26443376] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774] Dey A,Samanta MK,Gayen S,Sen SK,Maiti MK Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines Drought Tolerance and Yield Improvement in Rice Genotypes. PLoS ONE, 2016. 11(3): p. e0150763 [PMID:26959651] Zong W, et al. Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes. Plant Physiol., 2016. 171(4): p. 2810-25 [PMID:27325665] Dey A,Samanta MK,Gayen S,Maiti MK The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression. BMC Plant Biol., 2016. 16(1): p. 158 [PMID:27411911] Gui J, et al. OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice. Dev. Cell, 2016. 38(2): p. 201-13 [PMID:27424498]