PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021884.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 1263aa    MW: 141413 Da    PI: 7.1922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021884.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.31.2e-1510561105255
         AP2    2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55  
                  +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  Do021884.1 1056 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYSTPVAAARAYDTAVFYLRG 1105
                  69*****99.**********732...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525407.09E-57139412IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3003.2E-16157298IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009318.2E-52158438IPR002182NB-ARC
CDDcd019830.00487178196No hitNo description
PRINTSPR003649.1E-15178193No hitNo description
PRINTSPR003649.1E-15250264No hitNo description
PRINTSPR003649.1E-15347361No hitNo description
Gene3DG3DSA:3.80.10.101.9E-18493878IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520586.46E-26509880IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003649.1E-15672688No hitNo description
Gene3DG3DSA:3.30.730.101.5E-2910551114IPR001471AP2/ERF domain
CDDcd000182.77E-2810561114No hitNo description
PROSITE profilePS5103222.73410561113IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2010561115IPR016177DNA-binding domain
PfamPF008473.5E-910561105IPR001471AP2/ERF domain
SMARTSM003801.7E-3610561119IPR001471AP2/ERF domain
PRINTSPR003671.2E-1010571068IPR001471AP2/ERF domain
PRINTSPR003671.2E-1010951115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1263 aa     Download sequence    Send to blast
MRSRSIIKRD LEEIIAILKG SASDSKLEDH AMMVSCWTKE VRELSYDIED FVDQYEHAVV  60
ARSRSGPTPR RKMTRRPRSK TTPLGLHEKL RRRLWMANKL REFSLRTQEA LQRHGIYSLG  120
GISGTAFSST STDVSSSSSW HTAPFEDDDV HVGIDLSMNK LEEWLTTVQD GEQQKLNVVS  180
IVGFGGVGKT TLANKLYQKI GWQFECRAFL RTSRKPDMRK IFISMLSQVR PHQPPDNWKV  240
HSLISSIRTH LQDKRYLIVI DNLWATSTWD IIKCALPDGN NCSRILITTE IEDLAMQSPG  300
IDSKYVFKMK PLSEDDSRKL FFSTLFGPQG TCPPELRDAS YEIIRRCGGL PLAIVTIASV  360
LASQMGRQDQ WGYVNKSLGC SLMTNRTFDG LKDILSLSYY NLPQHLKACL LYMSLYQDDN  420
IIWKDDLVNQ WIAEGFFCAT EGQDKQEISR AYFDELVSRK MILPVDRNDN GEVLSCVVHH  480
MVLDLIITYK SLSENFVTAI HHSQATTTTL ADKVRRLSLH FGNAEDAMPP TNMRLSQVRT  540
LAFFGVFKCM PSIVEFRLLQ VLILHFWGDN DSIILDLTRI TELFRLRYLK VSSNVTLELQ  600
TQMRGLQSLE TLTIDARISA VPTDIVHLPG LLHLKLPAET NLPSGIGQVT SLRTLGYFDL  660
IGNSLENLQS LSKLTNLQDL QLACCTAQEP ENVKDKMELL LGSILGELRN LRSLTVVRVV  720
SYGNSLDAAG ATSMRATASS DGFSSVFFPL TLLESCRFSQ RIWIFSCLPK CFGQPNLRIL  780
KIGLNKIVRD DVDVLRGLPA LAVLSLYVHT KPAERIVIGK VGFSVLKYFK FKCCDPWLKF  840
EVEAMPNLRK LELGFNAHRA DHSSTIPVGI EHLTSLKEVW AKIGGAGSEV SHRKAAELAL  900
RDAIGVDARC LRVTIECVNQ TIGCTENQSS ITREAEYGCS EQHEIDEDDF DQLDEYVEEE  960
SDEDYGEIVD SKLPLLLPST PPGAATSAAA QDIRKGRSRG GGSSSVASVT QAPQGEYRPS  1020
SEESAPAAAA KVQQEEEETL TKELQQPSKN LVPRRQYRGV RMRKWGKWVA EIREPHKRTR  1080
IWLGSYSTPV AAARAYDTAV FYLRGRSARL NFPDEIPALE LPEGETRGPD GGTLLSAASI  1140
RKKAIEVGSR VDALHTGMMV RPHGEQQKQH HHLPQLQQQY AEKQPAAWSG RAWASSPESS  1200
DDDAVDALQT GTIAPPREAE VTPPRQSPLQ RPAKRMAAWR SGANNPDVPW AEWAPCPVSS  1260
DTE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C1e-45142726151728Disease resistance RPP13-like protein 4
6j5t_F1e-45142726151728Disease resistance RPP13-like protein 4
6j5t_G1e-45142726151728Disease resistance RPP13-like protein 4
6j5t_L1e-45142726151728Disease resistance RPP13-like protein 4
6j5t_O1e-45142726151728Disease resistance RPP13-like protein 4
6j5u_A1e-45142726151728Disease resistance RPP13-like protein 4
6j5v_A1e-45142726151728Disease resistance RPP13-like protein 4
6j5w_A1e-45142726151728Disease resistance RPP13-like protein 4
6j6i_C1e-45142726151728Disease resistance RPP13-like protein 4
6j6i_F1e-45142726151728Disease resistance RPP13-like protein 4
6j6i_G1e-45142726151728Disease resistance RPP13-like protein 4
6j6i_L1e-45142726151728Disease resistance RPP13-like protein 4
6j6i_O1e-45142726151728Disease resistance RPP13-like protein 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021884.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956575.10.0putative disease resistance RPP13-like protein 3 isoform X3
TrEMBLA0A1E5UY600.0A0A1E5UY60_9POAL; Putative late blight resistance protein-like protein R1B-17
STRINGSi028710m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.12e-42DREB and EAR motif protein 3