PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021855.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 465aa    MW: 50979.4 Da    PI: 4.3504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021855.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.44e-08713511126
         NAM  11 deelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgk...rknratk..sgyWkatgkdkevls 94 
                 d el+   L + +++  ++  +++++vd++++ P +L +          + ++ ++ wyf++k++ k+a+gk   +++ra+   +  W++  + k v  
  Do021855.1   7 DGELI--ALLRGLRAGAVDH-SFVHRVDVCSAAPAELVAdlepvpgtdlTEDGYNSVWYFYCKKRYKNAQGKpsgHRQRAIGggDTCWHSEARPKVVDG 102
                 66777..3445555555555.679*************755778887764223345599*********99877555556666623556**9999877766 PP

         NAM  95 kkgelvglkktLvfykgra.pkge...ktdWvmhey 126
                 ++g    +   L + ++++ ++g+   +  W+m ey
  Do021855.1 103 SEG---ATFCNLSYGRKKQgSSGRsfdRLGWCMIEY 135
                 333...333456665332202222333778999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.7631153IPR003441NAC domain
SuperFamilySSF1019416.8E-147153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MACKTSDGEL IALLRGLRAG AVDHSFVHRV DVCSAAPAEL VADLEPVPGT DLTEDGYNSV  60
WYFYCKKRYK NAQGKPSGHR QRAIGGGDTC WHSEARPKVV DGSEGATFCN LSYGRKKQGS  120
SGRSFDRLGW CMIEYDDTQD GGGDHVLCKV YRSSSSLAKG KPRSSSSSSK STSSSKRKAA  180
GDHDEARATK LIYDEQMQQD YTIFSNNYPM PCYQGMSPMF GYVEYGYGVQ QQCVELNQGG  240
EYGLVPSTMA QANVEERIGC PEMFRGEEEQ QQPSAQGSEF VETEYGLLPS EVAQINVQEW  300
IDCPEMFEGE EKQGQEQQSG EPEQGGELVE TPSDGVLALE VTDEPTVEEL LCQETTSGEG  360
SGMPTAVTPP DGDFFIGVDG ECLFGVGEGD QSMQMQHQPR AEPDPIDELI QSPKTPRGPW  420
RSFWPNSLLT SCSAQRQFQA SAAAMACQHQ GSQWMHPLQL PFLMC
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021855.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5W7H90.0A0A1E5W7H9_9POAL; Uncharacterized protein
STRINGSi033182m1e-95(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4574632