PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do021723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 173aa MW: 18705 Da PI: 9.3088 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.2e-15 | 98 | 154 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ +r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk + ++lk e+a+l + Do021723.1 98 RKNIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRQCKQLKVEMAALIQ 154 6889********************************************999998755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-15 | 93 | 154 | No hit | No description |
SMART | SM00338 | 1.2E-13 | 94 | 158 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.645 | 96 | 152 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.96E-16 | 98 | 152 | No hit | No description |
SuperFamily | SSF57959 | 1.06E-11 | 98 | 153 | No hit | No description |
Pfam | PF00170 | 1.7E-12 | 98 | 153 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MPRSPQLSLS GCSSLFSLSS TSTSRDNDSA AAAPVPPPPP SLHPLPPRGP LLSLSVGGGG 60 GDEEQEDEEE YLLSGLDLQL TGAGGSNSSG RCDGDDERKN IRMMKNRESA LRSRARKRAY 120 VQELEKEVRR LVNENLKLKR QCKQLKVEMA ALIQASSSKS SSHIRRTSSS TQL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do021723.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT070122 | 1e-107 | BT070122.1 Zea mays full-length cDNA clone ZM_BFc0109J06 mRNA, complete cds. | |||
GenBank | EU956324 | 1e-107 | EU956324.1 Zea mays clone 1560828 bZIP transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961973.1 | 4e-61 | protein FD | ||||
TrEMBL | A0A1E5V075 | 1e-119 | A0A1E5V075_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J00689.1.p | 7e-61 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 7e-15 | bZIP family protein |