PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do021595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 347aa MW: 36449.1 Da PI: 6.958 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 75.3 | 8.1e-24 | 248 | 310 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv L+a N +L++el++lkk ++ +++e+ Do021595.1 248 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVTDLTAINGTLRSELDQLKKACEDMQAEN 310 89*********************************************************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-16 | 243 | 307 | No hit | No description |
Pfam | PF00170 | 2.1E-21 | 248 | 310 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.8E-20 | 248 | 312 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.576 | 250 | 313 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.31E-10 | 251 | 305 | No hit | No description |
CDD | cd14702 | 1.30E-19 | 253 | 303 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 255 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
MASSASTTSG EERPSGAPRD TSAVPGAAAA PPQAHAEWAA SMQAYYATGG QPYAWHAAAQ 60 QHMIAAAAAA GAPYGTPVPF PMSFHPAYYA HPALATGVPY PASDPVAVAE GKSKTKISGA 120 PSVGSAPGSS DGRSEELSDK RDASAEHKLF PSAKRRKSSS ADVQGEPSQA ATMQDAAAKT 180 RSAAKRSSAA KLSVSTPDTE AISNSRPNLN IGMDLWSSSP VKAESSGQGE INAAAPSQHD 240 VALSQMDERE LKRERRKQSN RESARRSRLR KQQECEELAQ KVTDLTAING TLRSELDQLK 300 KACEDMQAEN SQLMGEMDQA EAPCVVTTLS IQIDTSKARH GNNDSSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 264 | 270 | RRSRLRK |
2 | 264 | 271 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do021595.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021317833.1 | 1e-169 | DNA-binding protein EMBP-1 isoform X2 | ||||
Swissprot | P25032 | 1e-68 | EMBP1_WHEAT; DNA-binding protein EMBP-1 | ||||
TrEMBL | A0A1E5UVK4 | 0.0 | A0A1E5UVK4_9POAL; Uncharacterized protein | ||||
STRING | Si039367m | 1e-158 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2160 | 36 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.1 | 4e-31 | G-box binding factor 1 |