PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021533.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 295aa    MW: 32567.5 Da    PI: 6.165
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021533.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.23e-075078432
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLe 32
                 k+ rr+++NReAAr+sR+RKk e  +L+
  Do021533.1 50 QKVLRRLAQNREAARKSRLRKKLESSKLK 78
                5899******************9999984 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-54787No hitNo description
PROSITE patternPS0003605469IPR004827Basic-leucine zipper domain
PfamPF141443.7E-33128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MADASSRTDT STVVDTEDKN QRLENGQSGA LVMASNSSDR SDRSDKPMDQ KVLRRLAQNR  60
EAARKSRLRK KLESSKLKLA SLEQELQKAR QQGIFISSSG DQTHSMSGNG AMTFDLEYSR  120
WQEEQNKQIN ELRTAVNAHA SDSDLRLIVD GIMAHYDEIF RLKGVAAKAD VFHILSGMWK  180
TPAERCFLWL GGFRSSELLK LLVNQLEPLT EQQLMGLSNL QQSSQQAEDA LSQGMEALQQ  240
SLAETLAGSL GPSGSSGNVA NYMGQMAMAM GKLGTLENFL RQGSTNFREE AKALD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021533.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7278050.0KJ727805.1 Zea mays clone pUT5757 bZIP transcription factor (bZIP52) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984573.10.0transcription factor TGA2.2 isoform X1
RefseqXP_004984574.10.0transcription factor TGA2.2 isoform X1
SwissprotQ6IVC31e-172TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A1E5UZL90.0A0A1E5UZL9_9POAL; Transcription factor HBP-1b(C38)
STRINGPavir.Ib01484.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-109bZIP family protein
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]