PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do020981.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family HB-other
Protein Properties Length: 331aa    MW: 36450 Da    PI: 4.421
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do020981.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.56.1e-10259309353
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                  R +++k qle+Le+++ +++ p+ +++  + + ++L+ + +  WF  rR 
  Do020981.1 259 ARKRLKKVQLETLERVYLRSKRPTNTMISSIVQVTNLPRKTIVKWFEDRRE 309
                 58999********************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.382254314IPR001356Homeobox domain
SMARTSM003892.1E-4256318IPR001356Homeobox domain
SuperFamilySSF466894.71E-10256311IPR009057Homeodomain-like
CDDcd000867.83E-9257308No hitNo description
Gene3DG3DSA:1.10.10.606.1E-9259309IPR009057Homeodomain-like
PfamPF000461.6E-7259309IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MATVLPLAVL AAASASAAPG TCISGAPVPA PFLGTPVRLR LRSPPRGVAC ALRRRPSKYK  60
TKIQSEEEVV AAEDTMDDND EDGALEALFK QLEEDLENDD LSVDDDDDEI SEEDMARFEK  120
ELAEAIEDVG GADESAGDSL LSSGDYGNGE QIDGSEQPEL KTWQLRRLAR ALKIGRRKTS  180
IKNLAGELGL DRALVIELLR NPPPKLLLMS DSLPDEAPSK PEVKELEPPS STTVDEVDTT  240
EIEPQVELPV HVMSAEWSAR KRLKKVQLET LERVYLRSKR PTNTMISSIV QVTNLPRKTI  300
VKWFEDRREQ DGVPDHRVAF TRSLSETVAS S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258266ARKRLKKVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo020981.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811667.10.0protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A1E5V1330.0A0A1E5V133_9POAL; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
STRINGGRMZM2G163641_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP107003542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.13e-58overexpressor of cationic peroxidase 3