PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do019426.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family WRKY
Protein Properties Length: 272aa    MW: 29197.2 Da    PI: 9.5123
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do019426.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.42.2e-214097258
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE.EEEEEES--SS CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv.veitYegeHnh 58
                +Dgy W+KYGqK +k+ +  rsY+rC ++ C+vkkkve   +dp   + i+Y g H+h
  Do019426.1 40 EDGYGWKKYGQKFIKNIQKNRSYFRCRHKLCSVKKKVEWHPSDPAGdLRIVYLGAHQH 97
                7******************************************975499********9 PP
2WRKY68.97.7e-22182239258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT.EEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk.vveitYegeHnh 58 
                 +Dgy+W+KYGqK +k+ +  rsY+rC ++ C +kkkve   +dp+ ++ ++Y g H+h
  Do019426.1 182 EDGYEWKKYGQKFIKNIQKIRSYFRCRHKLCGAKKKVEWHPSDPSgALRVVYDGAHQH 239
                 7******************************************985789********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.40934100IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.7E-223598IPR003657WRKY domain
SuperFamilySSF1182901.06E-193698IPR003657WRKY domain
SMARTSM007742.9E-223999IPR003657WRKY domain
PfamPF031068.7E-194097IPR003657WRKY domain
PROSITE profilePS5081118.2176242IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.1E-23177242IPR003657WRKY domain
SuperFamilySSF1182902.22E-20178242IPR003657WRKY domain
SMARTSM007745.0E-24181241IPR003657WRKY domain
PfamPF031066.3E-20182239IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MASTTSQPAA ISKGEEERKK EEEAAPPSEA GNGSRLVMPE DGYGWKKYGQ KFIKNIQKNR  60
SYFRCRHKLC SVKKKVEWHP SDPAGDLRIV YLGAHQHGSG APPSSAQGAG GGGGGSSNRY  120
ELGAQYFGAT GPARIDSESN QETSLPRCSS VQGSEGGERN QRDEAEAAVA EAGNGNQLVM  180
PEDGYEWKKY GQKFIKNIQK IRSYFRCRHK LCGAKKKVEW HPSDPSGALR VVYDGAHQHG  240
SPPSSSSAAA GGGGASNKYE LGAQYFGGAR SQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo019426.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9706332e-90EU970633.1 Zea mays clone 348246 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004986337.28e-57probable WRKY transcription factor 71
TrEMBLA0A1E5V4G40.0A0A1E5V4G4_9POAL; Uncharacterized protein
STRINGSi038001m7e-55(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.19e-19WRKY DNA-binding protein 3