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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do018650.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
GRAS |
| Protein Properties |
Length: 454aa MW: 49137 Da PI: 5.4073 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do018650.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 312.1 | 1.2e-95 | 61 | 451 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl..fsevsPilkfshl 96
++lL++cA+a++++d++l+q++L+ l+++a pdgd++qRl+a f+ AL ar +r ++ + +a+++ +s ++++++a++l f++++P+++f++
Do018650.1 61 EQLLVHCANAIEANDATLTQQILWVLNNIAPPDGDSNQRLTAAFLCALVARASRtgACKAVTAAVAAAVESAALHVHRFTAVELasFVDLTPWHRFGYT 159
79***************************************************943444555555444444444777777777789************* PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl.......vak 184
+aN aIleaveg vH++ ++ ++++Q p+L++ LasR+egpp lR+T+ + +++ ++ee+g +L +fA++ +v+++f+v+ ++
Do018650.1 160 AANAAILEAVEGFPVVHVVELGTTHCMQIPTLIDMLASRAEGPPILRLTVADVASNApppaLDMSYEELGAKLINFARSRNVTMDFRVVtttpadaFTS 258
**************************************************9998888888777889**********************97776665555 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
+++l++++L ++ Eal+Vn+++ lh+++de++ + + r+ +Lk +++l P++vvvve++ad ++++ + r+ a+++ + +d++++ lp+
Do018650.1 259 LVDQLRVQQLVLDGSEALVVNCHMLLHTVPDETAGSVNlaqpvsLRTMLLKSLRTLDPNLVVVVEEDADFTAGDVVGRLRAAFNFLWIPYDAVDTFLPK 357
66777888888888****************998877766667767999*************************************************** PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
se+r+++E+e +g++++nv+a+eg er+er+e ++W +r+++aGF++v+++e+aa ++k++l++++ g+ ++ e++ lvl+Wk++++v++SaW
Do018650.1 358 GSEQRRWYEAE-IGWKVENVLAQEGVERVERQEDRGRWGQRMRSAGFRAVAFGEEAAGEVKAMLNEHA-AGWGMKREDDDLVLTWKGHNVVFASAW 451
***********.********************************************************.889999********************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MMQFTHTAPP PSPLHPNGHG GLGLGLFLDA GAPRARPWPG SFPTPASKIS LGNLNSTSCM 60
EQLLVHCANA IEANDATLTQ QILWVLNNIA PPDGDSNQRL TAAFLCALVA RASRTGACKA 120
VTAAVAAAVE SAALHVHRFT AVELASFVDL TPWHRFGYTA ANAAILEAVE GFPVVHVVEL 180
GTTHCMQIPT LIDMLASRAE GPPILRLTVA DVASNAPPPA LDMSYEELGA KLINFARSRN 240
VTMDFRVVTT TPADAFTSLV DQLRVQQLVL DGSEALVVNC HMLLHTVPDE TAGSVNLAQP 300
VSLRTMLLKS LRTLDPNLVV VVEEDADFTA GDVVGRLRAA FNFLWIPYDA VDTFLPKGSE 360
QRRWYEAEIG WKVENVLAQE GVERVERQED RGRWGQRMRS AGFRAVAFGE EAAGEVKAML 420
NEHAAGWGMK REDDDLVLTW KGHNVVFASA WAPS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC243238 | 0.0 | AC243238.1 Panicum virgatum clone PV_ABa020-K10, complete sequence. |
