PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do018469.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 417aa    MW: 43714.6 Da    PI: 6.957
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do018469.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.28.2e-20211535128
         NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk. 95 
                 f  hP+d  l++ yL++ v++  l    +++ +d+y++eP dL +      ++ +e+ wyf s+ ++k+++g+rk+r+++  +g W+     k+vl+  
  Do018469.1  21 FDSHPSDLVLIKSYLRPWVAQGVLAG-AFLHAADVYSAEPADLVRryrpaVARDGERVWYFLSPLRTKSPRGRRKSRTVAggTGWWHGEAGPKRVLDPl 118
                 6679******************9888.78**************74356645556888********************76634777**99999***9999 PP

         NAM  96 .kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                  ++++vg ++ + f  +g++  +++t W+m e rl
  Do018469.1 119 dGRRHVGYRQNFSFMrRGEDGAPVRTGWIMMELRL 153
                 88999**********667999999********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-3017177IPR003441NAC domain
PROSITE profilePS5100531.96617177IPR003441NAC domain
PfamPF023652.1E-1120153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MLRPPPRIPI PSSLLAAAAA FDSHPSDLVL IKSYLRPWVA QGVLAGAFLH AADVYSAEPA  60
DLVRRYRPAV ARDGERVWYF LSPLRTKSPR GRRKSRTVAG GTGWWHGEAG PKRVLDPLDG  120
RRHVGYRQNF SFMRRGEDGA PVRTGWIMME LRLHDGDDRG GLADMLEGLV LCKVYRSPRH  180
PETAAAAADD EDGEEESCEV TVAAPAPAGS HSDVADDGGS SEAPPVVAVS GGKRKADDDE  240
GSSGATAATP RHHIKNAANV LGVKVKAAAD DENERHVKNA ANVLGVKEKA AADDENEISG  300
ATTAAAPGRK EAKAADADAD EDSSTSSRAR KRAKTADGEG AGAASACKKN AGVPATQLHC  360
PQCGFHLGVL QAVVAPAKSV SETERDTGIA RSDAAAPQGG GRTADASGKD PSFQTFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo018469.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022680448.11e-147NAC domain-containing protein 71-like
TrEMBLA0A1E5VCV70.0A0A1E5VCV7_9POAL; Uncharacterized protein
STRINGSi032755m1e-140(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1966278
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-17NAC domain containing protein 47