PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do015782.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 588aa    MW: 64708.5 Da    PI: 9.1593
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do015782.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.89.3e-19121531128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratk.....sgyWk.atgkdke 91 
                 lp  ++F+Ptd ++v +yL ++++g +  + ++++ + d y++ Pw+L  ++ +e + + +f  + + ++ +g r+ r +       g+W+ ++g+d +
  Do015782.1  12 LPSACKFDPTDADIVAHYLLPRAAGVPnPPYAHAVIDDDPYSCPPWELLCRHGHEASdHAFFLGPPSDTAVNGGRACRRVGepggvVGVWRgQKGEDMD 110
                 57889********************9944444558888**********84433333337788888888889999999964445555799*978899999 PP

         NAM  92 vlsk.kgel........vglkktLvfykgrapkgektdWvmheyrl 128
                 ++++ +  +           +  L +y+  +p+  +t Wvmhey++
  Do015782.1 111 LVVTrG-GErggaelqfRFRRYYLGYYRSGDPE--STGWVMHEYHI 153
                 888742.33355556667888999999655555..9********96 PP
2NAM55.81.5e-174095451128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk..sgyWk.atgkdkevlsk 95 
                 lp  ++F+Ptd +++ +yL +++ g +++ ++++ + d +++ Pw+L +++   e++++ f  + +  + +g r+ r ++   g+W+ + g+d +++++
  Do015782.1 409 LPSTCKFDPTDADILAHYLLPRAIGFPNPYAHAVIDDDTCSCGPWELFRRHGYeESDHTLFVGPPSDPAVNGGRACRRVRggGGVWRgQRGEDYDLVTR 507
                 57889**********************9998999999**********74443314446677788888888999999866645889**78899***9998 PP

         NAM  96 kgel.......vglkktLvfykgrapkgektdWvmheyrl 128
                 + el       +  +  L +y+  a ++  + Wvmhey++
  Do015782.1 508 GAELgaaelrfTFRRYNLSYYR--AGDPDTSGWVMHEYHI 545
                 44446666676889999****5..555559********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-2310168IPR003441NAC domain
PROSITE profilePS5100523.8112170IPR003441NAC domain
PfamPF023653.4E-1214153IPR003441NAC domain
SuperFamilySSF1019412.75E-22407561IPR003441NAC domain
PROSITE profilePS5100522.369409562IPR003441NAC domain
PfamPF023651.5E-10411545IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    Send to blast
MEARRFGFDP SLPSACKFDP TDADIVAHYL LPRAAGVPNP PYAHAVIDDD PYSCPPWELL  60
CRHGHEASDH AFFLGPPSDT AVNGGRACRR VGEPGGVVGV WRGQKGEDMD LVVTRGGERG  120
GAELQFRFRR YYLGYYRSGD PESTGWVMHE YHILQPKLRP GAMLSRIRIT GRAKKERKKQ  180
QQQQAAADAA MNVAPGPDQP GPSNYHVDDR ASGNAAAVVA SDGEGTSGGA QADVLHQCDK  240
NGGSMGDAAG YYALLSARAH GTLLGETAGY YSAFLKAEED GRSCVNNSNF TSNEGTNYGD  300
GIDLKYWDSN ALFRVKPAPN RRRNPIRIQL LFLLTASEYI RERGRSILSS RSQLVVRKKQ  360
GKGGLHPAKE PKKEQSNPTK KPSSSRRRRV SSFVQLPMEA WRFGFDPSLP STCKFDPTDA  420
DILAHYLLPR AIGFPNPYAH AVIDDDTCSC GPWELFRRHG YEESDHTLFV GPPSDPAVNG  480
GRACRRVRGG GGVWRGQRGE DYDLVTRGAE LGAAELRFTF RRYNLSYYRA GDPDTSGWVM  540
HEYHILEPKL HPGAVLSRIR ITGRAKKERE KQQQQEAAAA AAAKNVAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo015782.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025827520.11e-100NAC domain-containing protein 10-like
TrEMBLA0A3L6PM461e-104A0A3L6PM46_PANMI; NAC domain-containing protein 18-like
STRINGSi027836m3e-78(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926