PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do014532.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 346aa MW: 37784.4 Da PI: 5.291

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do014532.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.6	4.1e-11	270	319	5	48
CHHHCHHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk......aeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+ a++ eLe+kv Le+eN++Lkk+ Do014532.1 270 RRQKRMIKNRESAARSRARKQvylyylAYTNELENKVSRLEEENERLKKQ 319 69****************96666667899**************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-13	264	319	No hit	No description
SMART	SM00338	7.6E-6	266	328	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.97E-23	270	321	No hit	No description
Pfam	PF00170	6.3E-9	270	319	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.17E-7	270	321	No hit	No description
PROSITE pattern	PS00036	0	273	288	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MPPAKAATES PFMIQAMASQ AGGGRGGDAG SVQRGQMQGL ARQGSLYNLT LDEVQNHLGE 60 PLLSMNFDEL LKSVFPDSVD PTGTVTGKPD PMSSLQQQGS IVMPPQLSKK TVDEVWKGIQ 120 DGPETSAVEV GQQRQERQPT LGEMTLEDFL VKAGVVPEGL MRDSDDLRSN MDTVGSHVVA 180 ASTSSLNPGA QWLQQYQQQA LESQQASLVG SYMASQLAPQ PLSVATGAML DPIYSDGQIT 240 SPTLGAFSDP QTPGRKRGAS GEVVDKVIER RQKRMIKNRE SAARSRARKQ VYLYYLAYTN 300 ELENKVSRLE EENERLKKQK EFDEILSSAP PPEPKYQHRR TSSAAF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MPPAKAATES PFMIQAMASQ AGGGRGGDAG SVQRGQMQGL ARQGSLYNLT LDEVQNHLGE  60
PLLSMNFDEL LKSVFPDSVD PTGTVTGKPD PMSSLQQQGS IVMPPQLSKK TVDEVWKGIQ  120
DGPETSAVEV GQQRQERQPT LGEMTLEDFL VKAGVVPEGL MRDSDDLRSN MDTVGSHVVA  180
ASTSSLNPGA QWLQQYQQQA LESQQASLVG SYMASQLAPQ PLSVATGAML DPIYSDGQIT  240
SPTLGAFSDP QTPGRKRGAS GEVVDKVIER RQKRMIKNRE SAARSRARKQ VYLYYLAYTN  300
ELENKVSRLE EENERLKKQK EFDEILSSAP PPEPKYQHRR TSSAAF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do014532.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025808689.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	1e-80	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	C5YZX9	0.0	C5YZX9_SORBI; Uncharacterized protein
STRING	Sb09g023920.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-79	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]