PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do013931.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 392aa    MW: 42074.6 Da    PI: 9.9908
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do013931.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-1178114339
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                 + k  rr+++NReAAr+sR+RKka++++Le+    L+
  Do013931.1  78 DAKTLRRLAQNREAARKSRLRKKAYVQNLETSRIRLS 114
                 67999*************************8655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-873122No hitNo description
SMARTSM003382.6E-476129IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.82978122IPR004827Basic-leucine zipper domain
PfamPF001702.0E-879114IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-780122No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
PfamPF141444.6E-28164243IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MHVVEPAPKH GSMGTNSTAS NAAGAGPSKR PPPSNVPPAG PKDGKPAAVK REAGSRSGAM  60
GSGTPSTSNK QEGSRTPDAK TLRRLAQNRE AARKSRLRKK AYVQNLETSR IRLSHLEQEL  120
HRSRAQGAVF GGGALSGGNG GLSPEAAWFD MEHARWQEEH GKMMRHLRAA LEAEHAAAAP  180
PAADAQLRQL VDAAAAHHGV LAELKAAMAR ADAFHLVSGA WVSAAERCFL WIGGFRPSEL  240
VKVAIRHAEP LTEQQAMGFC GVQQWAREVE AALDHELQAM HRSVSDAVSS DAAALLCPYS  300
DVPGYMATMS LAIGKLASME AFVTQADALR LQVLNRLPQI LTARQSARCF LAIDDYSHRL  360
RVLSELWHTR PRHEPAAGSS HGPPYQSRDG LL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo013931.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9513161e-49EU951316.1 Zea mays clone 695528 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012704240.10.0transcription factor TGAL9 isoform X4
SwissprotQ52MZ21e-120TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1E5V0N00.0A0A1E5V0N0_9POAL; Transcription factor HBP-1b(C1)
STRINGPavir.J04905.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.17e-88bZIP family protein