PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do013831.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 180aa    MW: 19994.3 Da    PI: 8.8631
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do013831.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.61e-1187146463
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  +r rr  +NRe+ArrsR RK+ ++ +L   ++ L + N++L  +l++    ++++  e+
  Do013831.1  87 ERRRRRTVSNRESARRSRVRKQTQLTQLWAQAAHLRGDNRDLLGRLNRALRDCDRVLREN 146
                 57999*****************************************99988888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-883148IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.6886149IPR004827Basic-leucine zipper domain
PfamPF001703.6E-986145IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-788134No hitNo description
SuperFamilySSF579596.41E-988136No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
CDDcd147021.08E-1195140No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MYPGEAASVV LPYLPLPSAP TAAFGFGPHY HTPALDDHFL FPYSSNDLLA LPYSAAAAAH  60
CQQHAGQLFL DEHVLCPDND RQQLAEERRR RRTVSNRESA RRSRVRKQTQ LTQLWAQAAH  120
LRGDNRDLLG RLNRALRDCD RVLRENARLG GERDGLQRRL QELAGGGDDG GSSRVAATTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792RRRRRT
2100106RRSRVRK
3100107RRSRVRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo013831.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965226.14e-68basic leucine zipper 8
TrEMBLA0A1E5WE521e-127A0A1E5WE52_9POAL; Uncharacterized protein
STRINGSi007892m2e-66(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126