PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do011734.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 330aa    MW: 36483.1 Da    PI: 4.2883
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do011734.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.91.3e-1221378127
         NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk... 95 
                 +P+de l++ yL+++++gk       ++++d+y+ +P +L  +      + +++ + wyfFs+++    ++  ++r   ++  W   g d + + +   
  Do011734.1   2 EPSDERLIDGYLRPNITGKGGVGGGYVHDADVYSDHPYNLVlQhdpavvTGDGDGRIWYFFSPTRYVGGKNAPRRRgRSHQRSWTVAGADGKKKGTwsp 100
                 7*******************777688**************643567653333366799*****998887766666655667778877766655555555 PP

         NAM  96 .....kgelvglkktLvfykgrapkgektdWvmheyr 127
                      kg++ g  + L + + + +   +  W+m ey 
  Do011734.1 101 gkikyKGRAGGYFRNLKYQETTPSGVIRPGWIMVEYG 137
                 666668888999*****99777777779********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.071155IPR003441NAC domain
PfamPF023653.1E-102137IPR003441NAC domain
SuperFamilySSF1019414.71E-213155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MEPSDERLID GYLRPNITGK GGVGGGYVHD ADVYSDHPYN LVLQHDPAVV TGDGDGRIWY  60
FFSPTRYVGG KNAPRRRGRS HQRSWTVAGA DGKKKGTWSP GKIKYKGRAG GYFRNLKYQE  120
TTPSGVIRPG WIMVEYGITE EHGGGDMVLC KVYKSGAGSD VPSRCTSASS DRKRKADAVQ  180
HPDDEAPTRA RRRQQQLQQQ TNEDDDAMLF AQIVESELEL ICDHETDNLP EGEPAAPEEA  240
AVTRVQSSQQ DPAEDDDDVM EISLDEFLGP SAPVERSRTA SPLPDEDEEE EDMCGLACPP  300
IDEGYLELIL SEESDPLVEF DPAFIEEFIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17379PRRRGRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo011734.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5W9630.0A0A1E5W963_9POAL; Uncharacterized protein
STRINGSi039946m9e-80(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.11e-10NAC domain containing protein 69