PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do009067.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 654aa    MW: 71071.7 Da    PI: 9.8147
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do009067.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-15241741128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeek...ew.yfFskrdkkya......tgkrknra........ 77 
                 l+pG+ F+P+   l+++yL +k+ + +    +  ++v + vd+y v P  Lp + +++++    w yfF++r   +a      +      a        
  Do009067.1  24 LAPGYVFRPSTRCLLDHYLVPKALDGRvaerNARDSVAEGVDVYAVRPAALPFQRRNRDEyghVWgYFFTTRPADAAgaaggsS------Agsshrefd 116
                 579*******************9999965533333468889***********54444444454779****99988774444331......122233345 PP

         NAM  78 .....tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                      ++ g+W+  g dk  + ++ge    ++ ++f+    g  +  ++t W m+e+rl
  Do009067.1 117 dvrevAAGGRWRRYGGDKGYVGADGEPYAFRRRFAFHepvAG-GNGERRTPWRMKEFRL 174
                 55555889************999**************44323.333369********98 PP
2NAM41.73.5e-132513911128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk...kvkaeekew.yfFskrdkkya.......tgkrknr..atksgy 82 
                 lp G+ F+P    l+++yL +k+ + ++++e+    + + v+++ v P  Lp    + ++  + w yfF++r +++        +g++  r  a+++g 
  Do009067.1 251 LPFGVYFQPDSRLLLDHYLVPKALDGRVPEENirdsAAEGVNVHAVRPAALPFprcNRNEYGQVWgYFFATRPSAAGggsgaggSGNHGARgvAAARGG 349
                 689********************999955533333358889**********944332223445779******999985655555444556654577999 PP

         NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 W   g +k  +  +ge+   ++t++++      g+kt W m+e rl
  Do009067.1 350 WLRYGGEKGYVGDDGEVYAFRRTFAYH----VGGKKTVWRMKELRL 391
                 ****999999999**************....67889*******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-1721176IPR003441NAC domain
PROSITE profilePS5100522.65724201IPR003441NAC domain
PfamPF023651.4E-926174IPR003441NAC domain
SuperFamilySSF1019414.71E-14248396IPR003441NAC domain
PROSITE profilePS5100518.462251418IPR003441NAC domain
PfamPF023655.8E-8252391IPR003441NAC domain
SuperFamilySSF1019413.79E-5532594IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MAQPPEATTA PVPALDSPGS LLELAPGYVF RPSTRCLLDH YLVPKALDGR VAERNARDSV  60
AEGVDVYAVR PAALPFQRRN RDEYGHVWGY FFTTRPADAA GAAGGSSAGS SHREFDDVRE  120
VAAGGRWRRY GGDKGYVGAD GEPYAFRRRF AFHEPVAGGN GERRTPWRMK EFRLNEAAPA  180
FRGVAFHPSA EGLVIWMVHN QVILDDDDPK LLLCNLILHE NPQHPTMAQP PDGTAAAVPS  240
PHRTPGSLSE LPFGVYFQPD SRLLLDHYLV PKALDGRVPE ENIRDSAAEG VNVHAVRPAA  300
LPFPRCNRNE YGQVWGYFFA TRPSAAGGGS GAGGSGNHGA RGVAAARGGW LRYGGEKGYV  360
GDDGEVYAFR RTFAYHVGGK KTVWRMKELR LNEAAPAFRG VVFHPSAKGL AIWKVYNEVI  420
PEEEPPVDYY SSDDEVGGAT VITPPQAVPA PYTTPRSISE VRFGYVFRPK ATTSSPGRST  480
AASPRTSGTP SPRASTSTPC VPGRSRSRAA IAIGTARSGA TSSPRGPRLR RRRREDPARR  540
ARTTSGTWRR YGGEKGYAGG DGEVYAFRRR FAYHVGGRKT VWRMKELRLN EAVPAFRGAV  600
FHPSAKGLVI WKVYNEVIPE EEPPVDYYNS DDEGGTTVMT VRGAVAAPAC PAAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo009067.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826306.14e-81uncharacterized protein LOC112901581
TrEMBLA0A2S3I7R41e-79A0A2S3I7R4_9POAL; Uncharacterized protein
STRINGSb06g019930.19e-66(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.14e-07NAC family protein