PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do007795.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 322aa    MW: 34547.7 Da    PI: 5.7126
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do007795.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.53.3e-16111521128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratk......sgyWkatgk.dke 91 
                 lpp  +F+Ptd ++v +yL +++ g +++ e++i + d +++ Pw++ +++ + ++++ +fF + + + + +kr +ra++       g+W  + +   +
  Do007795.1  11 LPPANKFNPTDLDIVAYYLLPRAIGFPNPYEHAIINGDPFSCPPWEFMRHHGHADSDYaFFFGPPRVSDP-NKRVSRAVAagkdgvGGVWDGQKShAIP 108
                 68999*************************999**************85555555555266666666555.688888744355566899*976651444 PP

         NAM  92 vlsk...kgel.......vglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +   +          +  ++ L +y+g +++ + + Wvm++y++
  Do007795.1 109 LVLTrgdG--PgapelaiKFRRHNLSYYHGPQKE-KTSGWVMNDYQI 152
                 44444550..145555658999******887776.7899******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-217168IPR003441NAC domain
PROSITE profilePS5100520.76711169IPR003441NAC domain
PfamPF023652.1E-1112152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEAACRFGFD LPPANKFNPT DLDIVAYYLL PRAIGFPNPY EHAIINGDPF SCPPWEFMRH  60
HGHADSDYAF FFGPPRVSDP NKRVSRAVAA GKDGVGGVWD GQKSHAIPLV LTRGDGPGAP  120
ELAIKFRRHN LSYYHGPQKE KTSGWVMNDY QIVEPKHLSA TVLYRIKITD REKKKQGKGK  180
QQDPPDPDQP GPSNYYAHGE PVGGQAGDEN GVVMGDTGAH YVDGGNGYLY EGYGDGFCQD  240
DNGGGGGCFI AGDSGGNDAN GVVMGETGGY YVDGRNNFLN QDSGYYSAHG DGRGGGDYCF  300
NGGDNNSYGH PYGGNGRSSN AS
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo007795.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703557.11e-108NAC domain-containing protein 101
TrEMBLA0A1E5VZS80.0A0A1E5VZS8_9POAL; Uncharacterized protein
STRINGSi027729m1e-101(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926