PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do004741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | bZIP | ||||||||
Protein Properties | Length: 220aa MW: 23868.3 Da PI: 8.8896 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.1 | 1.4e-11 | 108 | 160 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 e +r rr+ +NRe+ArrsR RK+ ++ eL+ v L + N++L +el++ Do004741.1 108 EERRRRRMVSNRESARRSRMRKQRQLSELRALVSHLRGANRRLLDELNRALRG 160 67899******************************************986555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.5E-8 | 105 | 157 | No hit | No description |
SMART | SM00338 | 2.7E-9 | 106 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.6E-9 | 107 | 156 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.243 | 108 | 178 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.3E-9 | 110 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 113 | 128 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.57E-13 | 115 | 159 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MYHHFHGEVA SLGFLSPPNA SFAGHHHMNM ALPPQAYFPP SFEPASAFQD AASLLAGDDG 60 DVASFELDTV VREAAHLAGR NGSPSSGSGS DGAASGYQLN AVAVAAEEER RRRRMVSNRE 120 SARRSRMRKQ RQLSELRALV SHLRGANRRL LDELNRALRG CADARRESAR LRDEKAELAK 180 KFEQLLQAAT ATEKSAASST SNRSCSSEPC NNTSTNNTSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 129 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do004741.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 1e-102 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821559.1 | 1e-108 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A1E5W2V3 | 1e-157 | A0A1E5W2V3_9POAL; Uncharacterized protein | ||||
STRING | Si014433m | 2e-98 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 6e-07 | basic leucine-zipper 58 |