PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do003686.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 313aa    MW: 34834.3 Da    PI: 7.3455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do003686.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.55.5e-49141403128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 
                 pGfrFhPt+eel+++yL + v+gkkl++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+  ++++
  Do003686.1  14 PGFRFHPTEEELLDFYLSHVVHGKKLHF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSadTKRV 111
                 9*************************99.99***************888999***************************************99877888 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +glkktLvfy+grap+g+ktdWvm+eyrl
  Do003686.1 112 IGLKKTLVFYQGRAPRGTKTDWVMNEYRL 140
                 ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-586165IPR003441NAC domain
PROSITE profilePS5100554.93912165IPR003441NAC domain
PfamPF023659.0E-2514140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAAGASMEVE QDLPGFRFHP TEEELLDFYL SHVVHGKKLH FDIIGTLNIY RHDPWDLPGM  60
AKIGEREWYF FVPRDRKAGS GGRPNRTTER GFWKATGSDR AIRSSADTKR VIGLKKTLVF  120
YQGRAPRGTK TDWVMNEYRL PDYGTGRGAP PPPKEDMVLC KIYRKATPLK ELEQRASAME  180
EMQRRGNAHY TARGSLVQAS ASAGDDYLSS DDAHDSFLFP SSSSSAPSGD SYSAPKEAKQ  240
EAADATVTVA STSLMQAANM AIVMQPPAVR HGDLPSLQLP TNLGVLDWMQ DPFQLRSPWQ  300
DQFFLSPLAH LLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-47816710170Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo003686.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1070900.0AK107090.1 Oryza sativa Japonica Group cDNA clone:002-121-G12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985821.10.0NAC domain-containing protein 35
SwissprotQ10S651e-156NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A1E5VQ140.0A0A1E5VQ14_9POAL; NAC domain-containing protein 35
STRINGSi036757m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-85NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]