PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do001762.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family WRKY
Protein Properties Length: 669aa    MW: 74811.3 Da    PI: 7.9669
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do001762.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.14.1e-2453114259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK ++g+ +pr YYrCt++   gCp++k+ve++ ++dp ++ ++Y++eH+++
  Do001762.1  53 HDGYQWRKYGQKIIRGNAYPRCYYRCTFHqdhGCPATKHVEQTnSQDPPLFRVIYTNEHTCS 114
                 7**************************998999*******975268**************97 PP
2WRKY63.14.6e-20244303358
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnh 58 
                 Dg+ WrKYGqK++k+se+pr Y+rC+++   +C + k +++++ edp + e+tY+ eH++
  Do001762.1 244 DGHLWRKYGQKKIKDSEYPRLYFRCSYRgdrQCLASKLLQQKNgEDPPLYEVTYTYEHTC 303
                 9**************************99999******98765389************98 PP
3WRKY23.61.1e-074514952059
                 S-EEEEEE-ST.T---EEEEEE-SSS....TTEEEEEEES--SS- CS
        WRKY  20 fprsYYrCtsa.gCpvkkkversaed....pkvveitYegeHnhe 59 
                   r YY+C  + +C++kkkv++++      p ++e+tY +eH+++
  Do001762.1 451 LCRYYYKCNRHrRCEAKKKVQQQDASrgplPPMFEVTYVNEHTCH 495
                 5799****9888*********99876444468***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-2438115IPR003657WRKY domain
SuperFamilySSF1182907.59E-2247114IPR003657WRKY domain
SMARTSM007741.6E-3552115IPR003657WRKY domain
PROSITE profilePS5081120.80554116IPR003657WRKY domain
PfamPF031062.2E-2454113IPR003657WRKY domain
SuperFamilySSF1182903.01E-20236306IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-20238306IPR003657WRKY domain
SMARTSM007744.4E-30242305IPR003657WRKY domain
PfamPF031061.0E-20244303IPR003657WRKY domain
PROSITE profilePS5081116.444244306IPR003657WRKY domain
SMARTSM007744.5E-4446496IPR003657WRKY domain
SuperFamilySSF1182901.26E-6450495IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.2E-9451496IPR003657WRKY domain
PfamPF031064.0E-9452495IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MAKRDDYMAS SSCCSNGAHK RLLQDCSSYA QEHAKNRRVR ISTRTDYTYA PYHDGYQWRK  60
YGQKIIRGNA YPRCYYRCTF HQDHGCPATK HVEQTNSQDP PLFRVIYTNE HTCSSTHVSD  120
YMASAIHIQQ IADASLRKAE TEIPSLTHCS ARHGLIKEEK DAIVSSLLTV INGCDVATSD  180
VGRAAMQENT PAPMARSSYE AIPSVSPVPL AASDELKMDF VEPPESHWRD KPSWVKLTYT  240
PYFDGHLWRK YGQKKIKDSE YPRLYFRCSY RGDRQCLASK LLQQKNGEDP PLYEVTYTYE  300
HTCGAPPVPF PDIVAEPPPA SREGLVLSRS QEEAMAVSQE VSRLFTEAMA VLKHANSCRV  360
DAATMAPEIV AANGIGLITP TKEKRVSLFT DRDVVYMKMT VVKRLAPSRR VERRRLQDGR  420
SHPRHTRMVT SGKNTAKRTF RIEVPQVATH LCRYYYKCNR HRRCEAKKKV QQQDASRGPL  480
PPMFEVTYVN EHTCHVLRAN DDDAARMASS PWTTNRHHAP AGVVDTARSD GGDRFDQFPR  540
IIGGGASGIA KEDEAIIVSC LATVISGAVP SPPSWWPPAA DASATDPTAF VSMPPLPGGR  600
SASLDGSVAD DGPMMIDNDT GFPWDSPSFC PVEEAGHQPT INHHHGDMHM DVARFADTVW  660
PEHTCGAWR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-132443031068OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo001762.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5V3T90.0A0A1E5V3T9_9POAL; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.22e-19WRKY DNA-binding protein 4