PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do001369.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family MYB
Protein Properties Length: 2563aa    MW: 280570 Da    PI: 6.9718
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do001369.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.41e-1510961144148
                       TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding    1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48  
                       +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl
       Do001369.1 1096 KGPWSPEEDAKLKAYIEEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 1144
                       79*********************************************97 PP
2Myb_DNA-binding35.62.1e-1111511193246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding    2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46  
                       g +T+eE+ ++  +    G++ W+ Ia+ ++ gRt++++k++w++
       Do001369.1 1151 GDFTEEEEHIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 1193
                       789******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd064104.99E-3123120No hitNo description
SMARTSM006666.8E-2534120IPR000270PB1 domain
SuperFamilySSF542771.45E-2136126No hitNo description
PfamPF005646.9E-1539120IPR000270PB1 domain
SuperFamilySSF561126.34E-638271058IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.202.8E-22834904No hitNo description
PROSITE profilePS5001135.178401217IPR000719Protein kinase domain
SMARTSM002207.6E-438401217IPR000719Protein kinase domain
PfamPF077143.1E-498411059IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
PROSITE patternPS001070846867IPR017441Protein kinase, ATP binding site
CDDcd139992.26E-798461058No hitNo description
Gene3DG3DSA:1.10.510.106.9E-409051063No hitNo description
PROSITE patternPS001080965977IPR008271Serine/threonine-protein kinase, active site
PROSITE profilePS5129414.71410911144IPR017930Myb domain
SuperFamilySSF466891.47E-2510931191IPR009057Homeodomain-like
SMARTSM007173.1E-1310951146IPR001005SANT/Myb domain
PfamPF002499.9E-1510961144IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.9E-2410971151IPR009057Homeodomain-like
CDDcd001674.38E-910981144No hitNo description
PROSITE profilePS5129421.92411451199IPR017930Myb domain
SMARTSM007172.9E-1011491197IPR001005SANT/Myb domain
PfamPF002494.7E-1011511193IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-2111521199IPR009057Homeodomain-like
SuperFamilySSF557972.75E-614841517IPR014044CAP domain
Gene3DG3DSA:3.40.33.100.00114861517IPR014044CAP domain
PfamPF050572.6E-618201859IPR007751Domain of unknown function DUF676, lipase-like
PfamPF050571.9E-418821925IPR007751Domain of unknown function DUF676, lipase-like
CDDcd019896.68E-4119202020No hitNo description
PROSITE profilePS5001123.5122522494IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.202.1E-622852321No hitNo description
SuperFamilySSF561123.91E-4422862490IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.103.8E-3223222491No hitNo description
PfamPF000691.5E-2023292485IPR000719Protein kinase domain
PROSITE patternPS00108023492361IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 2563 aa     Download sequence    Send to blast
MAPLAAAAGG SEAEGAPRMA KFLCSFGGSI LPRPLDGCLR YVGGDTRIVM LPRDISYADL  60
AARMRELYKD ADIIKYQQPD EDLDALVSVV NDDDVVNMME EYDKVIATGE VFTRLRIFLF  120
SQNCDDDAAS AVVHYNADER ETERRYVDAL NSLGDARSPS SPVSVEQLFG IGGNDSGILD  180
FAGLRHLNVP RPSQTQRYGE MDSPWSPAYV SPGQYGVHDP RDFPISPSSA TARFQVGAED  240
FDERIPEDFV RQSPKYRHYE AQSPPHMDNL VWLPPGAVIQ QNAGFPGNLS RSNNFLDGNS  300
VCDHCRSPFQ KGQGSVTDPR YVDPRWSRPV QQHFDQPGMT NEYPCHPSNS CQDCCRPSEH  360
YVGGQDIRIE NGIYVKEQNG GHPPMFYNDS HSHDRAWHVH TSQSHQRYED PRLHLPGNGR  420
VIEPYIVDTN SVNSAFAPNK VYEMHPASLG RSSHESPHYF HGSSELINDT YHNQQVGGSG  480
SYVQPAGFEE SPGQHYNHSS TYGADSFYQM QQNLPPIQSL RRRANSPVHA GSPYDSPHLP  540
IPNGSLNANF VRNTGDVSPR IPGLPAYDRM PNPWAPPNGS IPYRVVGHDI PAAMESTSAL  600
GPRSNPITAR YVQPFIAPES IQHQHGAQLR EVNLERVYAE HMPSSYVDGK VAVSALPLTD  660
QLSRLDTSTI KKPEGPEDNN STLNVNEATP LHDVDEPSTL PHHVGVVHEV DPKLGKPTEH  720
ESRTKQHEAE ATALQECGCL SEDRLNFLPE LIASVKKAAL EDATDTQIPQ SDANAAVSPV  780
PDDDDNGKKM DVATAGNTDV NQYSDLHGSI EQQKSSKIES TTAEAEALSK GLQTINNDDL  840
EEIRELGSGT YGSVYHGKWR GCDVAIKRIK ASCFAGRPSE RERLIADFWK EALILSSLHH  900
PNVVSFYGVV RDGPDGSLAT VSEFMVNGSL KQFLRKKDRT IDRRKRVILA MDAAFGMEYL  960
HGKNIVHFDL KCENLLVNMR DPQRPICKIG DLGLSKVKQH TLVSGGVRGT LPWMAPELLS  1020
GKSNMVSEKI DVYSFGIVMW ELLTGEEPYS DMRAAEIIGI KQSDLTLAEL KCEGWISLGS  1080
GAMGRAPCCD KASVKKGPWS PEEDAKLKAY IEEHGTGGNW IALPQKIGLK RCGKSCRLRW  1140
LNYLRPNIKH GDFTEEEEHI ICSLYISIGS RWSIIAAQLP GRTDNDIKNY WNTKLKKKLL  1200
GKRAPSRRAR ANQDPYLAAA GGSMCSTSGS AAAATPQALS ASALERIQLH MRLQGLYGAF  1260
GNDTNAAAAP QWSKLDMLLQ TNKLQLPGSL PTDAVATTVS VQQPQHLVDH QSIAAGAGAA  1320
VVEAEQQLSS AAAGANYMAP GSFERPKLGF YSPSAEAEVA ASAEMASCPM VGGYGAGGFG  1380
SHHDELMYDF LYSKYTSLGG CVAQGGQIPQ LPELQCPDGA AAVVGADEKF STWTAAPCDY  1440
GAAGGHQLQG NSIAMPPRRL PFVAAATTAV LLLLAGATAT DAKSLASSFL DPHNAARRAV  1500
GLRPLRWDKT LAAYAWRGRL TVAAAVLVGI ALLLAASNAD AYPGGGGDGN LRNQFLAQQN  1560
VARASMGLPA LVWDERVASY ARCYRPRNQT MMRPLAPLLL FSLLCLQLLA IAAAHASRAP  1620
ASYAAANRQH QAQPTPPYAR NATVYAASAA LCPGCTAWAE SLEFLYYHNL VRLARWELPL  1680
AWSPRMESTV RRGSATNREM PASSRFHTSA TCSLSSASSR SPPPRRRHAS LTGQSPSARP  1740
GRSRSRSRSS SRWPQPQPGL GLDLGILLGR KPRPGDERLD LANWMQCFQS QRLQPPSAEV  1800
EADTEGKAAG SCEEEEVGGE EADHLVVMVN GLYGSSADWK FAAEQFVKKL PGKVFVHREC  1860
SYSVLVLRFD LECNVLLQRV GDMDDGKPPL LVRMVEDCDD GKFMSALRSF KRRAAYANVT  1920
YDRGVEDAAG YKQPMDPQMK DLFLPFRCFC TRKDIHCKDV VLDDHDVAKS IVEFAAHAAI  1980
EKLVVGATAR GGFVRFKAEI SSTISKTAPD FCTVYVVTKG GKVTSVRQAI RQAPAVSPLR  2040
TIIQGPRPDH ATVAAPAQKW TPPPPSRGDA AMTPNVLDNP IMSPFARTGM SAGSARKPFP  2100
EFSLPESSDI SFIGSAPRRS TERYPPRLSS GSDGLDQHSF EARTPSRWGD SFGNDSTSHS  2160
QTSTSSWCSQ PTDDMEAEMK RLRLELKQTM EMYSTACKEA LSAKQKAMEL QRWKEKAKAR  2220
AAIEAAEAAQ RLADLEAQKR IGAEMKALKE AEERLRSMGA GARESVRYRK YTIEEIELGT  2280
DHFNETRKGR SQFQQEVEVL SCIRHPNMVL LLGACPDGGP VIPWQHRFRI AAEIATGLLF  2340
LHQTKPEPLV HRDLKPGNIL LDRNYVSKIS DVGLARLVPP SVADSVTQCH MTSAAGTFCY  2400
IDPEYQQTGL LGVKSDVYSL GVMLLQIVTA RPPMGLTHHV GRALERGTFA DLLDPAVHDW  2460
PMEEAHRFAE ISLRCCELRR KDRPDLATAV LPELNRLRAL GEDNMELCNP MSGRGGMHSS  2520
SAFHSSPYSQ PRHDPASDPT LGRPHHSSNA SQSAMPTRRS NYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ppz_A3e-39839243538249Serine/threonine-protein kinase CTR1
3ppz_B3e-39839243538249Serine/threonine-protein kinase CTR1
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo001369.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9431390.0EU943139.1 Zea mays clone 1567757 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5VV740.0A0A1E5VV74_9POAL; Transcription factor MYB36
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.17e-77myb domain protein 36