PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do001067.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family BES1
Protein Properties Length: 344aa    MW: 36308.8 Da    PI: 8.6887
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do001067.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.83e-64151571145
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 +g+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkgskp+e+++++g+s s sp+ss+q    
  Do001067.1  15 AGAGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGSKPQERMDVIGCSVSPSPCSSYQ---- 109
                 589********************************************************************************************.... PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasa......asllpvlsvlsl 145
                      sp++sy+asp+sssfps +s+ +++ ++       + +lp+l++ s+
  Do001067.1 110 ----LSPRASYNASPTSSSFPSGASSPFLPPNEMangtdgNPILPWLKTFSN 157
                 ....677777777777777777777666655544455555888888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.0E-6316155IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MASGGGGGGG SLGVAGAGRM PTWRERENNK RRERRRRAIA AKIFAGLRAH GGYKLPKHCD  60
NNEVLKALCN EAGWVVEPDG TTYRKGSKPQ ERMDVIGCSV SPSPCSSYQL SPRASYNASP  120
TSSSFPSGAS SPFLPPNEMA NGTDGNPILP WLKTFSNGTP SKKHPLLPPL LIHGGSISAP  180
VTPPLSSPSA RTPRMKTDWD ESAIQPPWHG AHSPCVVNST PPSPGRSMAP DPAWLAGIQI  240
SSTSPNSPTF SLVSTNPFSV FKESIPVGNS SRMCTPGQSG TCSPAIPGMP RPSDVHMMDV  300
ISDEFAFGSS TNGAQQAAGL VRAWEGERIH EDSGSDDLEL TLKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-221989372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-221989372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-221989372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-221989372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo001067.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817932.10.0protein BZR1 homolog 2
SwissprotQ0JPT41e-167BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBLA0A1E5VK730.0A0A1E5VK73_9POAL; Protein BZR1-like protein 2
STRINGPavir.Ea00221.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-88BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]