PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do000925.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 414aa    MW: 44776 Da    PI: 6.6815
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do000925.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.54e-10265317557
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                 kr +r   NR +A rs +RK  +i+eLe+kv+ L++e ++L  +l  l+  +a
  Do000925.1 265 KRVKRVLANRQSAARSKERKMRYIAELEQKVQILQTEATTLSAQLTLLQRDSA 317
                 999*****************************************999987766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-16261325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.553263326IPR004827Basic-leucine zipper domain
PfamPF001702.3E-9265317IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10265317No hitNo description
SuperFamilySSF579593.66E-11265315No hitNo description
CDDcd147032.81E-23266317No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MMQHQHQQHV QAQRVQQLGM PLPMATSFAP EPANAKQRPP GLPPTPPPVF AGQRPSPGDV  60
CMEVDTAAAL KAAHRRSRSD VPFGYFPPGS SGGQLPPPKV EAGWGHHGCG SGGEDDLFNA  120
YLNLEGLDGL NSSDERHDDG DSRGSSMKTN GADSSENESE GCAADSRAGG IRLWGDAGSA  180
DRREGLKRTA AGEPAAAPMA RHARSLSMDS LIGKLNFSAG AAANGVMPGP NRFSLEFGSA  240
EFTPVEMKKI MADDKLAEMA LADPKRVKRV LANRQSAARS KERKMRYIAE LEQKVQILQT  300
EATTLSAQLT LLQRDSAGIA TQNNELKFRL QAMEQQAQLR DALNEALTTE VQRLKLATAE  360
LRDSCSSNNL AHQLQLNAQD QIFQLHQQQQ QATQIPFYQL QQAQQNGAGK TEEP
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo000925.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025796879.10.0transcription factor RF2b-like
TrEMBLA0A1E5WJQ90.0A0A1E5WJQ9_9POAL; Transcription factor RF2b
STRINGSi035841m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35363576
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-62bZIP family protein