PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58500.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 168aa    MW: 18623.4 Da    PI: 9.5599
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58500.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.00113860123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C+++F++   L  H  +H
  KZV58500.1 38 FECKTCSRRFPSFQALGGHRASH 60
                89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.1E-936102No hitNo description
PfamPF139123.5E-133762IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.1183865IPR007087Zinc finger, C2H2
SMARTSM003550.273860IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804060IPR007087Zinc finger, C2H2
PfamPF139126.4E-1079104IPR007087Zinc finger, C2H2
PROSITE profilePS501579.82780107IPR007087Zinc finger, C2H2
SMARTSM003550.580102IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028082102IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MVMKRSREEN FEDITNLANC LMLFSGGMGA GGDLNRVFEC KTCSRRFPSF QALGGHRASH  60
KKPRQATGDQ PVSPPKQKTH ECSICGLEFA IGQALGGHMR RHRGAMNDDQ KHNKDSPFEH  120
LSLLPPQQSP VVKKSSSRRV LCLDLNLTPL ENKFLLGKAD APALHCFI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548814.13e-66zinc finger protein ZAT11-like
TrEMBLA0A2Z7DFY21e-121A0A2Z7DFY2_9LAMI; Uncharacterized protein
STRINGMigut.F00795.1.p2e-57(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.15e-35C2H2 family protein