PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58476.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 225aa    MW: 23821.3 Da    PI: 4.5926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58476.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-1666114255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  KZV58476.1  66 TYRGIR-CR-GGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 114
                 69***9.55.7*********843...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.9E-1766122IPR016177DNA-binding domain
SMARTSM003805.6E-2766128IPR001471AP2/ERF domain
PROSITE profilePS5103219.55966122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-2566122IPR001471AP2/ERF domain
PfamPF008471.2E-966114IPR001471AP2/ERF domain
CDDcd000182.20E-1467122No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MANRGRRGSS PNQTNPFIVV PNPEDQEYYN TTFTYTYDQE NSSPTPLPPH HSAAATPSPT  60
SGRHPTYRGI RCRGGKWVSE IREPRKTTRI WLGTYPTPEM AAAAYDVAAL ALKGPDAGIN  120
FPGLVASYPV PDSQSAGDIR AAAAMAAAAA AGAGGAMGGT GAPVFPGNEG SSSLATGYVD  180
EEELFDMPQL LVDMAGGMLL SPPRTAEDNE WPDNSSRNDS LWSYP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58476.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076239.28e-68LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF025
SwissprotQ9FJ906e-50ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A2Z7DF281e-163A0A2Z7DF28_9LAMI; Uncharacterized protein
STRINGVIT_16s0100g00400.t014e-59(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-46ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]