PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58092.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB
Protein Properties Length: 356aa    MW: 40102.3 Da    PI: 8.8012
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58092.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-092973345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+eE +++ +a + +  +   +W+ +a++++ g+t+ +++  + 
       KZV58092.1 29 RWTPEENKKFENALAIYDRDtpdRWDNVAAMIP-GKTAHDVIKQYK 73
                     9*****************99*************.*******99886 PP
2Myb_DNA-binding45.81.4e-14129173347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       KZV58092.1 129 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 173
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.7E-52576IPR009057Homeodomain-like
PROSITE profilePS512939.1042580IPR017884SANT domain
SMARTSM007178.7E-102678IPR001005SANT/Myb domain
PfamPF002493.8E-82974IPR001005SANT/Myb domain
SuperFamilySSF466896.9E-122983IPR009057Homeodomain-like
CDDcd001671.32E-82976No hitNo description
PROSITE profilePS5129421.106122178IPR017930Myb domain
SuperFamilySSF466892.28E-17123177IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-17125177IPR006447Myb domain, plants
SMARTSM007173.5E-13126176IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-12126173IPR009057Homeodomain-like
PfamPF002495.1E-12129173IPR001005SANT/Myb domain
CDDcd001671.06E-10129174No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MNRETAILSP ASYIKNSNWL FEENKVITRW TPEENKKFEN ALAIYDRDTP DRWDNVAAMI  60
PGKTAHDVIK QYKELVEDVS DIEAGLIPVP GYSPDSFTLE WVSKQMYGPV GKKNATIRCS  120
VHERKKGVPW TEEEHRQFLL GLKKYGKGDW RNISRNFVTT RTPTQVASHA QKYFIRQLSG  180
GKDKRRSSIH DITTVNLQET NQSDSPGKES CGSSEKSNPG ALMRFQGVPS FGHNMAPMNK  240
LPGSGLEHHD SMYRRIRSAA AIFVQAVGSQ YYRSAVGLVF MESAVELAME TSRVDSVVCI  300
DDISSAVIIQ QEATVISRKI QQMRRGARYG MSCDDISLDV ITISRWLSAD EAKRES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-1830921173RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00296DAPTransfer from AT2G38090Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58092.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094978.11e-122transcription factor DIVARICATA-like
SwissprotQ8S9H79e-94DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2Z7DEY80.0A0A2Z7DEY8_9LAMI; Transcription factor DIVARICATA-like
STRINGXP_009786719.11e-115(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-107MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]