PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57631.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 819aa    MW: 89341 Da    PI: 6.4303
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57631.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-20126181156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  KZV57631.1 126 KKRYHRHTPQQIQELETLFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 181
                 688999***********************************************999 PP
2START203.77.5e-643355591206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+ +ep+W ks     e +n +e+  +f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W+e+++    + +t++vis
  KZV57631.1 335 ELALSAMDELVKMAQTDEPLWIKSLeggrEVLNHEEYFNTFTPCIGmkpngFVTEASRETGMVIINSLALVETLMDSN-KWTEMFPciipRTSTTDVIS 432
                 57899**********************9999**********99988999*9***************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 sg      galqlm aelq+lsplvp Rd+ f+R+++q+ +g+w++vdvS+d  ++    + +  +++lpSg+l+++++ng+skvtwveh++++++++h
  KZV57631.1 433 SGmggtrnGALQLMHAELQVLSPLVPvRDVNFLRFCKQHAEGVWAVVDVSIDTVRETAGGPTFSSCRRLPSGCLVQDMPNGYSKVTWVEHAEYDESIIH 531
                 ********************************************************998**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+r+l+  g+ +ga++wva lqrqce+
  KZV57631.1 532 QLYRPLIAAGMGFGAQRWVAMLQRQCEC 559
                 **************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.04E-20113183IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.8E-21118183IPR009057Homeodomain-like
PROSITE profilePS5007117.184123183IPR001356Homeobox domain
SMARTSM003896.5E-17124187IPR001356Homeobox domain
CDDcd000866.16E-18125183No hitNo description
PfamPF000464.1E-18126181IPR001356Homeobox domain
PROSITE patternPS000270158181IPR017970Homeobox, conserved site
PROSITE profilePS5084843.397326562IPR002913START domain
SuperFamilySSF559611.51E-32328559No hitNo description
CDDcd088754.48E-126330558No hitNo description
SMARTSM002341.8E-48335559IPR002913START domain
PfamPF018521.7E-55335559IPR002913START domain
SuperFamilySSF559611.77E-24587812No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009827Biological Processplant-type cell wall modification
GO:0042335Biological Processcuticle development
GO:0043481Biological Processanthocyanin accumulation in tissues in response to UV light
GO:0048765Biological Processroot hair cell differentiation
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 819 aa     Download sequence    Send to blast
MNFGDFLDNG GGGGVRIVSD ILYNSNTSTP RSKIKGSMPT GAIAQPLLVS QSLAAKAMFN  60
SPGLSLALQT GMEGQGEVGR IGENFESTNV GGRRSRDEEH ESRSGSDNLD GVSGDELDAA  120
DKPPRKKRYH RHTPQQIQEL ETLFKECPHP DEKQRLELSR RLCLETRQVK FWFQNRRTQM  180
KTQLERHENS LLRQENDKLR AENMSMREMM RNPICTACGG PAIIGEISLE EQHLRIENAR  240
LKDELDRVCT LAGKFIGRPI SSLAASMGLP LPNSNLELGV GNNDFGGLNG LPPALHSGPP  300
HFGSGISPPL PIEQPSKPLN ITPIDRSLER SVYLELALSA MDELVKMAQT DEPLWIKSLE  360
GGREVLNHEE YFNTFTPCIG MKPNGFVTEA SRETGMVIIN SLALVETLMD SNKWTEMFPC  420
IIPRTSTTDV ISSGMGGTRN GALQLMHAEL QVLSPLVPVR DVNFLRFCKQ HAEGVWAVVD  480
VSIDTVRETA GGPTFSSCRR LPSGCLVQDM PNGYSKVTWV EHAEYDESII HQLYRPLIAA  540
GMGFGAQRWV AMLQRQCECL AILMSSSAPA RDHTAITAGG RKSMLKLAQR MTNNFCAGVC  600
ASTVHKWNKL NAGTVDEDVR VMTRKSVDDP GEPPGIVVSA ATSVWLPVSP QRLFDFLRDE  660
RLRSEWDILS NGGPMQEMAH IAKGQDHGNC VSLLRASAMN SNQSSMLILQ ETCIDAAGSL  720
VVYAPVDIPA MHVVMNGGDS AYVALLPSGF VIVPDGPGSR GPASNGMAHR VSGSLLTVAF  780
QILVNSLPTA KLTVESVETV NNLITCTVQK IKAALHCES
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00421DAPTransfer from AT4G00730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57631.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010661562.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A2G9HWV60.0A0A2G9HWV6_9LAMI; Transcription factor DLX
STRINGVIT_15s0048g02000.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]