PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57541.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 226aa    MW: 25032.7 Da    PI: 8.4941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57541.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-113985354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h e+ErrRR++iN  +++Lr l+P +     +K +Ka+ L ++++ +k+L
  KZV57541.1 39 KNHREAERRRREKINAHLATLRGLVPCN-----EKTDKAALLAEVINQVKQL 85
                58*************************9.....8*************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4213685IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-133994IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-93985IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-134095IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.8E-114291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MPIVRSLMFD GEKRELVNSS GRMATNNGVS EAKTMAALKN HREAERRRRE KINAHLATLR  60
GLVPCNEKTD KAALLAEVIN QVKQLKKTAT QASEGLHLPM DTDEVNIEKI EGSDGSFFLR  120
TSLCCEYRPD LLSDVRHAIK NLPIHLTKCE ISTLGSRIKT VLVLDITKEA TANSAENQEL  180
IIINSVRSTL SNILDKASAS AELAQELVFP QKRQRISYLD SSCSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449ERRRRE
24550RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57541.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830318.12e-83PREDICTED: transcription factor bHLH30-like
TrEMBLA0A2G9H6A12e-86A0A2G9H6A1_9LAMI; Uncharacterized protein
STRINGMigut.H01448.1.p7e-83(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.11e-35bHLH family protein