PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57112.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 145aa    MW: 16040.9 Da    PI: 6.9557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57112.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-18959256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                +ykG+r++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+g+
  KZV57112.1  9 KYKGIRRRK-WGKWVSEIRVP---G-TtERLWLGTYTTPEAAAVAHDVALYCLRGN 59
                8*****998.**********8...3.35*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.37E-17966IPR016177DNA-binding domain
PfamPF008472.4E-10958IPR001471AP2/ERF domain
SMARTSM003801.2E-26975IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-26969IPR001471AP2/ERF domain
CDDcd000181.05E-23969No hitNo description
PROSITE profilePS5103221.311969IPR001471AP2/ERF domain
PRINTSPR003676.9E-91021IPR001471AP2/ERF domain
PRINTSPR003676.9E-93248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MSGSSSAEKY KGIRRRKWGK WVSEIRVPGT TERLWLGTYT TPEAAAVAHD VALYCLRGNS  60
SPMGNFNFPS MLPGNVRMGM SPVEVQKAAS DAGLAIDARL LDSSSSLQHD PDGAQVMNWD  120
WSGRTQDHQH LNISVDDYLQ WSNQS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57112.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.13e-55PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I81e-39ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2Z7DBU91e-104A0A2Z7DBU9_9LAMI; Uncharacterized protein
STRINGMigut.C01360.1.p1e-54(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.16e-42ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]