PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV57092.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

GeBP

Protein Properties

Length: 396aa MW: 43074 Da PI: 5.4223

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV57092.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	113	1.8e-35	93	195	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++ Dei lLqG++d+++++g + ++d++afy+++k++ +++++k+qlveK+rrLKkK+++ v+k sgk+++f+++hd+ +fe+s+ KZV57092.1 93 KLFQRLWTDGDEIELLQGFLDYTTQRGGphssfnHHHHDTTAFYDQIKDKFQLDFNKNQLVEKLRRLKKKYRNVVNKFGSGKDFAFKSPHDHATFEISS 191 579**********************88877745566********************************************************* PP DUF573 94 kiWg 97 kiWg KZV57092.1 192 KIWG 195 *8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	4.2E-33	95	195	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence Send to blast
MASTQDPAAA AAAAHIFNED EDLLDDDDDD SSDRDEDDSA SSAAAAADLP PPTSSSAAQV 60 TIAVPGVPDP HHKQQLPDIV VAKKPAQLDD SRKLFQRLWT DGDEIELLQG FLDYTTQRGG 120 PHSSFNHHHH DTTAFYDQIK DKFQLDFNKN QLVEKLRRLK KKYRNVVNKF GSGKDFAFKS 180 PHDHATFEIS SKIWGASVLN GSSSAVLAIS APAPLSMYED DDDPGFPNFA YCQSPNPNGI 240 DVNSKTPRPR KRNRTGAVKV EDKQQPIFNS NTSYNQPPSA TTPIAATPVA AAGATQSVSS 300 VIEETVKSCL SPIFKELLGN SMSSNANPNG PCCVHGFASA LSPMPLGFAG AMAGVKVADE 360 KWRKQQILEL EVFSKRLELM QDQIKEQLLE LRSIGK

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence Send to blast

MASTQDPAAA AAAAHIFNED EDLLDDDDDD SSDRDEDDSA SSAAAAADLP PPTSSSAAQV  60
TIAVPGVPDP HHKQQLPDIV VAKKPAQLDD SRKLFQRLWT DGDEIELLQG FLDYTTQRGG  120
PHSSFNHHHH DTTAFYDQIK DKFQLDFNKN QLVEKLRRLK KKYRNVVNKF GSGKDFAFKS  180
PHDHATFEIS SKIWGASVLN GSSSAVLAIS APAPLSMYED DDDPGFPNFA YCQSPNPNGI  240
DVNSKTPRPR KRNRTGAVKV EDKQQPIFNS NTSYNQPPSA TTPIAATPVA AAGATQSVSS  300
VIEETVKSCL SPIFKELLGN SMSSNANPNG PCCVHGFASA LSPMPLGFAG AMAGVKVADE  360
KWRKQQILEL EVFSKRLELM QDQIKEQLLE LRSIGK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV57092.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020552957.1	1e-169	probable transcription factor At3g04930
TrEMBL	A0A2Z7DBS5	0.0	A0A2Z7DBS5_9LAMI; Mediator-associated protein 1-like
STRING	Migut.N01942.1.p	1e-145	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4052	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	7e-69	DNA-binding storekeeper protein-related transcriptional regulator