PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57010.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB
Protein Properties Length: 2093aa    MW: 236936 Da    PI: 7.4712
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57010.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33e-1718301877148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding    1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48  
                       +g+WT+ Ed++l d+vk +G g W++ +++ g++R++k+c++rw++yl
       KZV57010.1 1830 KGAWTAMEDKILMDYVKIHGEGKWRKLPKKAGLNRCGKSCRLRWLNYL 1877
                       79********************************************97 PP
2Myb_DNA-binding41.92.3e-1318841926246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding    2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46  
                       g  +t E++l+++++k+lG++ W++Ia +++ gRt++++k++w++
       KZV57010.1 1884 GHISTYEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNS 1926
                       666888***************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467857.59E-1188162IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.109.2E-1097160IPR011991Winged helix-turn-helix DNA-binding domain
CDDcd000901.71E-4109165No hitNo description
PfamPF041824.2E-15110191IPR007309B-block binding subunit of TFIIIC
PROSITE profilePS500904.86710791131IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.0E-2218221880IPR009057Homeodomain-like
PROSITE profilePS5129424.518251881IPR017930Myb domain
SuperFamilySSF466891.84E-2718281924IPR009057Homeodomain-like
SMARTSM007174.3E-1418291879IPR001005SANT/Myb domain
PfamPF002496.3E-1518301877IPR001005SANT/Myb domain
CDDcd001679.79E-1018321877No hitNo description
Gene3DG3DSA:1.10.10.608.7E-2118811931IPR009057Homeodomain-like
SMARTSM007175.4E-1218821930IPR001005SANT/Myb domain
PROSITE profilePS5129416.9218821932IPR017930Myb domain
PfamPF002491.5E-1118851926IPR001005SANT/Myb domain
CDDcd001671.30E-818901928No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2093 aa     Download sequence    Send to blast
MDSVVHLALQ EICCEGADGL HLQNLWPKLR PSLAAIGLPL CPNVKRVIWE NLVEVPGLQF  60
VEDEVTFSAE HVLKCSVEEC EHVKIFATEA MRKCFLGIYE IEASEYNLSD TQRLILERLA  120
AARENGIAQN DLAKQLHVPA NNLFYQLKKL ETQGLIVRQP TVIRKKEAAN NGEQKSGSVV  180
TTNMLYLYRY RKHLSCQQRL EITKEDNLLV DRGVADGLAE TNNDFGADIA RGDVRVKDFL  240
PALKTICDKL EKAEGKVLVV SDLKRDLGYR GTSGHRSWRN MCHRLKDAQV VEECCTVVNK  300
KEVTCLRLLQ SFSPSNFNPK SQVCRQNDND TEQSMALVKR GQITEQVVEL PILRQVYDMI  360
DSEGSKGLTN TEVCRKLGLC GKEYHKRIFN KMFTRFGFHL QAESHDRGVV YRVRTAGNVN  420
PESSKLESSM APNAKDLVLQ DGIESNSQSL NLDFHENLSQ TLQVVNNLAS MPEFSNSNYS  480
ENVAVITEPS NGMTMSGEGK CMQLSLWSQQ HPDIEPSNTV SDEKLQLVVS DLGTNNAIQE  540
TSLPAAVSRR RRRSSLNHPC LTVGAINSQR EHRILQMLQE EKFLIKPELH RCLESLEKEK  600
TTTMDRKTLE RILNKLQQEG HCKCLHVSVP AVTNCGRNRI IDVVLHPSVY SSLPELLGHI  660
HARQRDFESQ LRKPSNFHQK KGQSIPLLDN VQRIPNHIKL DVQSERSEAM RANGFVMAKM  720
VRTKLLHIFI WGWVSSSPGW DDAFLSRNQA RDRKNPHNTY WLFDLDSAIK SMPLKLFLQV  780
VGSAQKLEEM VEKCRSGLQL SDLPMNEYKG LVDTRAIGRL SWLIDILRRL KLIRLVSNGQ  840
PEDGTRSGPH TTLSHALEFK PYIEEPASAI ASPGFVSPDL RPQIRHDFVL SNKKAVHEYW  900
DTLEYCYAAV DPRAAFHAFP GSAVREVFHS RSWTSARVMT SGQRAEVLKC VTKDDSNRRL  960
SFSECEKIAK DLDLTLEQVL RVHYDKKVRR LTRFQRALDA EGHKLKLIKH KPIFASRKGK  1020
NKSGEVSSKL LEPTVADGQS SLLMIYDTGN NIEDPEEPLN EKDEDASMSI YKCALSSLKQ  1080
RKRKFSWTEE ADRQLVIEYA RHRAALGAKF HRLNWVSIPN LPASPDTCKR RMALLKTSDS  1140
LRKSLMKLCT LLAERYSEYL KQYQDKTLNY GDSEMMVRDY ASVDTGTRSS VPESWKWDDF  1200
DANNIKVALD NVLRHKRTAK LESVKDVFIE QDYMEDGVED WIKASGRKSS SSHQHRKYIK  1260
VSNGSRVGRQ IHESSAIANA TELFKLIFLS TSTAPEVPAL LAETLRHYSE HDLFAAFNYL  1320
REKKLMIGGN CNKPFVLSHH FLNSISLSPF PMDTGKRASK FANWLHEREK DLIEEGLDVP  1380
EDLQCGEVLN LCASLSLGEL SITPYLPAEG IGEAEDNRTS KRKLDIGELS GVNLCKKSKT  1440
SFVGEGEIIS RREKGFPGIK LHLLCETIPK LHFIESFKDD IWSSSLSGAP NQIVMSSAVD  1500
VDGISSHSDI EDQAREIFDS RRSIHLTIDG SESPWEAMAN FAENLAPSCI DDVKNLFFHP  1560
ESFRILNLAL QKSGDQGLSM KEISRVLNIQ DEQVLEIVVE VLEVFGRDCK VNGYDCVRVV  1620
DSLYRSKYFL TSVAEMRHDF THLRGQQSKM EQGNMATHAV QHVDDTVTSE NVNDINTDEV  1680
HRVTILNQSE DVVGRPTEIL SEDKTTVLKC FESSPHKRKE CRPLLTWMNG DGTVNELVYK  1740
GLVRRVLGIV MQNPGILEES IIKQMYCLNP QADVKMLVQS HGDTWQSGEG EQYCCYFFKA  1800
IEPSSLVSCI AGDFKIRMGR SPCSKEGLNK GAWTAMEDKI LMDYVKIHGE GKWRKLPKKA  1860
GLNRCGKSCR LRWLNYLRPD IKRGHISTYE EDLIIRLHKL LGNRWSLIAG RLPGRTDNEI  1920
KNYWNSNIAK KRAMADPKLA KRSSPKKENP SASQPQLPNS VGSHVIRTKA KRASEVFITT  1980
NPSQSVENVE STPAFGQSQV ENNTHKAEKL ESDQFGMADF KLDDKFFSDL FSSEIFTFSD  2040
QKLDDGLGED SLNNMNSTGY PSTNSCQIPD EKHQDLDIGS MIIMDSAMDW FQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C6e-231828193125127MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072577.10.0uncharacterized protein LOC105157796 isoform X1
TrEMBLA0A2Z7DBD40.0A0A2Z7DBD4_9LAMI; Uncharacterized protein
STRINGMigut.I01069.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-54MYB family protein