PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV56460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 288aa MW: 31980.2 Da PI: 9.0651 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.4 | 1.3e-08 | 161 | 208 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++++P + k + a +L + ++Y++sLq KZV56460.1 161 SHSLAERVRREKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 208 8*************************9....35599999*********9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.09E-16 | 155 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.86E-10 | 155 | 212 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.2E-16 | 157 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.605 | 157 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-5 | 161 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.8E-9 | 163 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MADHFPSGLQ KHKQSFSLSD IDPSIEFLHH FSGLNPSHQE SFTLNFQSLI GYPNHNTFTR 60 LPDCTGKSET FPGLYVQGHS SLVVPSATTD QNILKGNDRE EKKRKATVAS SSSPQVSATG 120 KMVKNKSRKG KKAKSTENEE GNEKPREVVH VRAKRGQATD SHSLAERVRR EKINERLRCL 180 QDIVPGCYKT MGMAVMLDEI INYVQSLQNQ VEFLSMKLTA ASTANDFNSD IDIMEAMQGL 240 PLYILQKAKA PLEALKIQDV ASQGPSPVQF APSHINFDAY PQLPHKSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV56460.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080441.1 | 3e-96 | transcription factor BEE 1-like | ||||
Swissprot | Q8GWK7 | 2e-53 | BEE3_ARATH; Transcription factor BEE 3 | ||||
TrEMBL | A0A2Z7D9S3 | 0.0 | A0A2Z7D9S3_9LAMI; BR enhanced expression 1 | ||||
STRING | Migut.D00641.1.p | 8e-85 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3971 | 23 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.2 | 1e-52 | BR enhanced expression 3 |
Publications ? help Back to Top | |||
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