PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56090.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 375aa    MW: 42790.9 Da    PI: 4.423
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56090.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.92.9e-14152236286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt++e+  L++a  e+  + +r++l+   W+ev++k+ +e ++er+ +qC+++++ l+k+ykk+k   +  t es+s+++ +++++
  KZV56090.1 152 WTEHETVILLDAWGERFLKQGRKSLRSEEWQEVAEKVsQESKIERTDTQCRNRLDTLKKKYKKEKMKLGV-TGESTSKWVCYKKMD 236
                 *************************************88999***********************99997.799999*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-20151237No hitNo description
Gene3DG3DSA:1.10.10.601.3E-4151216IPR009057Homeodomain-like
PROSITE profilePS500906.539152209IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MDDDVDTSFP SSPYASKRQG LSLEDENSAQ NVGSQFAEDG DNNDDDDDDD DDGAANEEID  60
DEVEDKAEED EEEDDDDDEG KGVLRIGEDD YGDLNEDGEE DDDFDDLQRH PKKRKLKTLS  120
NYEFAPRVQA LPSAAALNPK PSYGGRNPLT DWTEHETVIL LDAWGERFLK QGRKSLRSEE  180
WQEVAEKVSQ ESKIERTDTQ CRNRLDTLKK KYKKEKMKLG VTGESTSKWV CYKKMDMLLS  240
SIPQKAAHLS AVDSEEHLKV HLNCSNGLHE IRDSPDNSVS AESVPPKKTK KSQIKGRSAS  300
FKQLADSIQK FVGIYEKIEN SKRERILELE KMRMDFHRDL ELQKRRILEK SQAEIAKIRK  360
GDYEDFVMSA ENDSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56090.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072329.11e-124trihelix transcription factor ASIL1-like
RefseqXP_011072330.11e-124trihelix transcription factor ASIL1-like
TrEMBLA0A2Z7D8Z50.0A0A2Z7D8Z5_9LAMI; Uncharacterized protein
STRINGXP_009609888.11e-114(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72302431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-56Trihelix family protein