PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV56030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25811 Da PI: 4.5543 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.3 | 1.8e-05 | 174 | 208 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+++ Lr+++P a k++s +++L +Av+Y++sL KZV56030.1 174 RMRTMVKVLRSMVPGA-----KRMSTVTVLDEAVQYLQSL 208 67777788******99.....89***************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.559 | 159 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.1E-4 | 170 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.6E-6 | 173 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.09E-7 | 173 | 213 | No hit | No description |
SuperFamily | SSF47459 | 2.62E-8 | 173 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MFPALNYFMQ NTEMFPVLNN RRVPVPYDIE PFGPFHGVDI QSSEACPRNF VIFDQSNAGS 60 HIIFHPEIRS KFFDFCLADS ESILKGEDDR KNTKCEGDFF SLLNEDSDDI DALLSMEDVE 120 NEGYEDDEVS TARTDAIFEC NSPGSCSNYE SAPRKCSVLG ASSMIGCNYK KGERMRTMVK 180 VLRSMVPGAK RMSTVTVLDE AVQYLQSLKA QVHNLEVLGA DSPTKSAARK V |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV56030.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011085262.1 | 5e-61 | transcription factor bHLH144 | ||||
Refseq | XP_011085263.1 | 5e-61 | transcription factor bHLH144 | ||||
Refseq | XP_011085264.1 | 5e-61 | transcription factor bHLH144 | ||||
TrEMBL | A0A2Z7D8S3 | 1e-172 | A0A2Z7D8S3_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8124 | 19 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.2 | 3e-24 | bHLH family protein |