PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55835.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 319aa    MW: 35482.4 Da    PI: 5.8251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55835.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.2e-1683131355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr++  +g+WvAeIr+p     +   r +lg+f + +eAa a+++a+++++g
  KZV55835.1  83 YRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFSSGFEAALAYDEAARAMYG 131
                 9****999.**********6.....337************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.6E-3082140IPR001471AP2/ERF domain
PROSITE profilePS5103221.00882139IPR001471AP2/ERF domain
CDDcd000182.36E-2982140No hitNo description
SMARTSM003802.5E-3482145IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-1983139IPR016177DNA-binding domain
PfamPF008473.3E-1283131IPR001471AP2/ERF domain
PRINTSPR003671.3E-88394IPR001471AP2/ERF domain
PRINTSPR003671.3E-8105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MALLHQDAML VSQPVNHSRT RKSRRRKDGT KNVAETLAKW KEYNVKLDSG NIVDKPKRKA  60
PAKGSKKGCM RGKGGPENVR YNYRGVRQRT WGKWVAEIRE PHRGSRLWLG TFSSGFEAAL  120
AYDEAARAMY GSVARLNFPN YDPSRRGAKE HDYVPTVSTS DSSHSSISEV GNGIMPKIED  180
SDVMSHIGGT SQEADTPMSD GWEGVKIEAM GEEVDQEDIW RELKKEPYES VHNNGNQLEP  240
LSFDQMFDAE ELLTTLGSTS ANAPGAHVGV QHPGSAQTAP QVEQARNGFE LDFLQPGRPE  300
DDHLTLDDLF FDIDPDLVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1682139563ATERF1
3gcc_A2e-1682139563ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12027RKSRRRKD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55835.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019245341.11e-79PREDICTED: dehydration-responsive element-binding protein 2A-like
TrEMBLA0A2Z7DB370.0A0A2Z7DB37_9LAMI; Dehydration-responsive element-binding protein 2A-like
STRINGXP_009594350.14e-75(Nicotiana tomentosiformis)
STRINGMigut.F00629.1.p2e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.17e-45ERF family protein