PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55602.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 290aa    MW: 33571.9 Da    PI: 8.3093
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55602.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.71.1e-27183233151
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 k+r++W+peLH++Fv a+++LGG+e AtPk+i+++m+v+gLt+++vkSHLQ
  KZV55602.1 183 KQRRCWSPELHQQFVAALQRLGGIEMATPKQIRDVMNVEGLTNDEVKSHLQ 233
                 79************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.991180240IPR017930Myb domain
SuperFamilySSF466897.7E-13181234IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-23181233IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-22183234IPR006447Myb domain, plants
PfamPF002491.1E-5185234IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MVLEFHIQAL EEEVRHSSAS KHPLYYSIHF LEDAIEILKK EIIRCKRSGG DSAVEELMPT  60
KSSSEGCSRA KDRSEIGEKK EWMSKVQLWS TFVQYNNNFD TNNEDPLLHN KSSYGGYEAS  120
SSGGNFNHKD GAFIPFLSAT MKNKGVDGFS SLAVESEVEP TDSNEKRKAP QLPEPHPQPL  180
QKKQRRCWSP ELHQQFVAAL QRLGGIEMAT PKQIRDVMNV EGLTNDEVKS HLQVQLNNIL  240
YNFVIAFINI YDSKRTILRC WYQYYDRIFH FFVFQKYRHY IRKLPSSARN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55602.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7DE130.0A0A2Z7DE13_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84972229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-24G2-like family protein